importFIMO_local_split: utility to read FIMO outputs from local resource(cluster),...
In TFutils: TFutils
Description
Usage
Arguments
Value
Examples
Description
utility to read FIMO outputs from local resource(cluster), assuming bed text split by chromosome
Usage
1
importFIMO_local_split(tf, chr)
Arguments
tf
character(1) file id
chr
character(1) chromosome name
Value
data.table instance
Examples
1
2
3
4
requireNamespace("GenomicRanges")
requireNamespace("IRanges")
importFIMO_local_split("M5946_1", "chr1")
dim(importFIMO_local_split("M5946_1", "chr17"))
TFutils documentation built on Nov. 8, 2020, 8:28 p.m.
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Description Usage Arguments Value Examples
Description
utility to read FIMO outputs from local resource(cluster), assuming bed text split by chromosome
Usage
1 | importFIMO_local_split(tf, chr)
|
Arguments
tf |
character(1) file id |
chr |
character(1) chromosome name |
Value
data.table instance
Examples
1 2 3 4 | requireNamespace("GenomicRanges")
requireNamespace("IRanges")
importFIMO_local_split("M5946_1", "chr1")
dim(importFIMO_local_split("M5946_1", "chr17"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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