get_rslocs_38: utility to obtain location etc. for rsids of SNPs

Description Usage Arguments Note Examples

View source: R/ensRsLoc.R

Description

utility to obtain location etc. for rsids of SNPs

Usage

1
get_rslocs_38(rsids = c("rs6060535", "rs56116432"))

Arguments

rsids

character vector of dbSNP identifiers

Note

Uses rest.ensembl.org, posting to variant_recorder/homo_sapiens. Parses result minimally, using only the first SPDI to obtain location information, adding 1 as ensembl genomic coordinates are zero-based.

Examples

1
if (interactive()) get_rslocs_38() # see https://stat.ethz.ch/pipermail/bioc-devel/2020-October/017263.html

TFutils documentation built on Nov. 8, 2020, 8:28 p.m.