tffamCirc.prep: set up list of pfms in motifStack protocol
In TFutils: TFutils
Description
Usage
Arguments
Value
Note
Examples
Description
set up list of pfms in motifStack protocol
Usage
1
tffamCirc.prep(tffam = "Paired-related HD factors{3.1.3}", trimfac = 0.4)
Arguments
tffam
character(1) name of TF family as found in TFutils::hocomoco.mono field TF family
trimfac
fraction passed as parameter t to motifStack::trimMotif
Value
a list of pfm instances as defined in motifStack
Note
Uses MotifDb, motifStack to create a list of pfms
Examples
1
2
n1 = tffamCirc.prep()
str(n1)
TFutils documentation built on Nov. 8, 2020, 8:28 p.m.
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Description Usage Arguments Value Note Examples
Description
set up list of pfms in motifStack protocol
Usage
1 | tffamCirc.prep(tffam = "Paired-related HD factors{3.1.3}", trimfac = 0.4)
|
Arguments
tffam |
character(1) name of TF family as found in TFutils::hocomoco.mono field |
trimfac |
fraction passed as parameter |
Value
a list of pfm instances as defined in motifStack
Note
Uses MotifDb, motifStack to create a list of pfms
Examples
1 2 | n1 = tffamCirc.prep()
str(n1)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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