pathway.visualization: pathway.visualization

Description Usage Arguments Value

View source: R/visualization.R

Description

Visualise pathways informations

Usage

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pathway.visualization(
  x,
  title = paste("Pathways:", paste(names(pathways), collapse = ", ", sep = "")),
  file = NA,
  pathways.color = "Set2",
  aggregate.pathways,
  pathways,
  ...
)

Arguments

x

A TRONCO complian dataset

title

Plot title

file

To generate a PDF a filename have to be given

pathways.color

A RColorBrewer color palette

aggregate.pathways

Boolean parameter

pathways

Pathways

...

Additional parameters

Value

plot information


TRONCO documentation built on Nov. 8, 2020, 5:51 p.m.