xmcmc: Object of class XdeMcmc

In XDE: XDE: a Bayesian hierarchical model for cross-study analysis of differential gene expression

Description

An object of class XdeMcmc is created by fitting the Bayesian hierarchical model to the expressionSetList example data.

Usage

data(xmcmc)

Details

The xmcmc data example was obtained as described in the XDE vignette.

Examples

data(xmcmc)
xmcmc

##ordinarily, one should not need to change the directory in an object
##of class XdeMcmc -- therefore, a replacment method is not defined
pathToLogFiles <- system.file("logFiles", package="XDE")
xmcmc@directory <- pathToLogFiles

##The $ operator can be used to extract chains. For instance, here we
##extract the c2 chain
c2 <- xmcmc$c2
plot.ts(c2)

XDE documentation built on Nov. 8, 2020, 5:02 p.m.