A numeric vector indicating which chains to write to file and, for those parameters that are written to file, how often the chains should be written to file.
An object of class
Replacement methods are only available for objects
XdeParameter. Accessor methods are available for
objects of class
A named numerical vector. The first element (thin) specifies how often to write chains to file. For instance, if output=2 the chains will be written to file every other iteration. Elements 2 - 22 of the vector are indicators for whether to write the write the chains of the Bayesian parameters to file.
Parameters indexed by gene and study (Delta, Phi, Nu, and sigma2) grow very large quickly.
Loading required package: Biobase Loading required package: BiocGenerics Loading required package: parallel Attaching package: 'BiocGenerics' The following objects are masked from 'package:parallel': clusterApply, clusterApplyLB, clusterCall, clusterEvalQ, clusterExport, clusterMap, parApply, parCapply, parLapply, parLapplyLB, parRapply, parSapply, parSapplyLB The following objects are masked from 'package:stats': IQR, mad, sd, var, xtabs The following objects are masked from 'package:base': Filter, Find, Map, Position, Reduce, anyDuplicated, append, as.data.frame, basename, cbind, colMeans, colSums, colnames, dirname, do.call, duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted, lapply, lengths, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rowMeans, rowSums, rownames, sapply, setdiff, sort, table, tapply, union, unique, unsplit, which, which.max, which.min Welcome to Bioconductor Vignettes contain introductory material; view with 'browseVignettes()'. To cite Bioconductor, see 'citation("Biobase")', and for packages 'citation("pkgname")'. Welcome to XDE version 2.22.0 thin potential acceptance nu DDelta 2 0 0 0 0 a b c2 gamma2 r 1 1 1 1 1 rho delta xi sigma2 t 1 0 1 0 1 l phi theta lambda tau2R 1 0 1 1 1 tau2Rho probDelta diffExpressed 1 0 1
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.