Files in alevinQC
Generate QC Reports For Alevin Output
NEWS.md
README.md
alevinQC documentation built on Feb. 4, 2021, 2:01 a.m.
NAMESPACE
DESCRIPTION
LICENSE
R/plotAlevinHistogram.R
R/alevinQCReport.R
R/plotAlevinKneeNbrGenes.R
R/plotAlevinBarcodeCollapse.R
R/readAlevinQC.R
R/plotAlevinQuantPairs.R
R/plotAlevinKneeRaw.R
R/alevinQC-pkg.R
R/checkAlevinInputFiles.R
R/alevinQCShiny.R
R/plotAlevinQuant.R
inst/doc/alevinqc.html
inst/doc/alevinqc.Rmd
inst/doc/alevinqc.R
inst/extdata/alevin_report_template.Rmd
inst/extdata/alevinQC_screenshot2.png
inst/extdata/alevinQC_screenshot1.png
inst/extdata/alevin_example_v0.14/cmd_info.json
inst/extdata/alevin_example_v0.14/lib_format_counts.json
inst/extdata/alevin_example_v0.14/aux_info/meta_info.json
inst/extdata/alevin_example_v0.14/aux_info/alevin_meta_info.json
inst/extdata/alevin_example_v0.14/alevin/whitelist.txt
inst/extdata/alevin_example_v0.14/alevin/featureDump.txt
inst/extdata/alevin_example_v0.14/alevin/raw_cb_frequency.txt
inst/extdata/alevin_example_pre0.14/cmd_info.json
inst/extdata/alevin_example_pre0.14/lib_format_counts.json
inst/extdata/alevin_example_pre0.14/aux_info/meta_info.json
inst/extdata/alevin_example_pre0.14/alevin/whitelist.txt
inst/extdata/alevin_example_pre0.14/alevin/quants_mat_rows.txt
inst/extdata/alevin_example_pre0.14/alevin/filtered_cb_frequency.txt
inst/extdata/alevin_example_pre0.14/alevin/quants_mat_cols.txt
inst/extdata/alevin_example_pre0.14/alevin/quants_mat.gz
inst/extdata/alevin_example_pre0.14/alevin/MappedUmi.txt
inst/extdata/alevin_example_pre0.14/alevin/featureDump.txt
inst/extdata/alevin_example_pre0.14/alevin/raw_cb_frequency.txt
inst/extdata/alevin_example_pre0.14/alevin/predictions.txt
build/vignette.rds
tests/testthat.R
tests/testthat/test-alevin-v0.14.R
tests/testthat/test-alevin-pre0.14.R
vignettes/bibliography.bib
vignettes/alevinqc.Rmd
man/plotAlevinQuant.Rd
man/checkAlevinInputFiles.Rd
man/plotAlevinBarcodeCollapse.Rd
man/readAlevinQC.Rd
man/alevinQCReport.Rd
man/plotAlevinHistogram.Rd
man/plotAlevinKneeNbrGenes.Rd
man/plotAlevinQuantPairs.Rd
man/alevinQC-pkg.Rd
man/alevinQCShiny.Rd
man/plotAlevinKneeRaw.Rd
