Files in alevinQC
Generate QC Reports For Alevin Output

NEWS.md
LICENSE
DESCRIPTION
README.md
NAMESPACE
inst/doc/alevinqc.R inst/doc/alevinqc.Rmd
inst/doc/alevinqc.html
inst/extdata/alevin_report_template.Rmd
inst/extdata/alevinQC_screenshot1.png
inst/extdata/alevinQC_screenshot2.png
inst/extdata/alevin_example_pre0.14/lib_format_counts.json
inst/extdata/alevin_example_pre0.14/cmd_info.json
inst/extdata/alevin_example_pre0.14/aux_info/meta_info.json
inst/extdata/alevin_example_pre0.14/alevin/MappedUmi.txt
inst/extdata/alevin_example_pre0.14/alevin/raw_cb_frequency.txt
inst/extdata/alevin_example_pre0.14/alevin/quants_mat_rows.txt
inst/extdata/alevin_example_pre0.14/alevin/filtered_cb_frequency.txt
inst/extdata/alevin_example_pre0.14/alevin/quants_mat.gz
inst/extdata/alevin_example_pre0.14/alevin/whitelist.txt
inst/extdata/alevin_example_pre0.14/alevin/predictions.txt
inst/extdata/alevin_example_pre0.14/alevin/quants_mat_cols.txt
inst/extdata/alevin_example_pre0.14/alevin/featureDump.txt
inst/extdata/alevin_example_v0.14/lib_format_counts.json
inst/extdata/alevin_example_v0.14/cmd_info.json
inst/extdata/alevin_example_v0.14/aux_info/alevin_meta_info.json
inst/extdata/alevin_example_v0.14/aux_info/meta_info.json
inst/extdata/alevin_example_v0.14/alevin/raw_cb_frequency.txt
inst/extdata/alevin_example_v0.14/alevin/whitelist.txt
inst/extdata/alevin_example_v0.14/alevin/featureDump.txt
vignettes/bibliography.bib
vignettes/alevinqc.Rmd R/readAlevinQC.R R/alevinQCReport.R R/plotAlevinKneeRaw.R R/plotAlevinQuantPairs.R R/alevinQCShiny.R R/checkAlevinInputFiles.R R/plotAlevinBarcodeCollapse.R R/plotAlevinQuant.R R/plotAlevinKneeNbrGenes.R man/checkAlevinInputFiles.Rd man/plotAlevinBarcodeCollapse.Rd man/plotAlevinQuant.Rd man/plotAlevinKneeRaw.Rd man/plotAlevinQuantPairs.Rd man/alevinQCShiny.Rd man/readAlevinQC.Rd man/alevinQCReport.Rd man/plotAlevinKneeNbrGenes.Rd
build/vignette.rds
tests/testthat.R tests/testthat/test-alevin-pre0.14.R tests/testthat/test-alevin-v0.14.R
alevinQC documentation built on Oct. 31, 2019, 2:08 a.m.