Man pages for alevinQC
Generate QC Reports For Alevin Output

alevinQCReportGenerate alevin summary report
alevinQCShinyGenerate alevin summary shiny app
checkAlevinInputFilesCheck that all required input files are available
plotAlevinBarcodeCollapseSummary plot of cell barcode collapsing
plotAlevinHistogramHistogram of selected summary statistic
plotAlevinKneeNbrGenesKnee plot of the number of detected genes per cell
plotAlevinKneeRawKnee plot of raw cell barcode frequencies
plotAlevinQuantPanel of plots with quantification summary statistics
plotAlevinQuantPairsPairs plot with quantification summary statistics
readAlevinQCRead alevin data required to generate summary report
alevinQC documentation built on Feb. 4, 2021, 2:01 a.m.