plotAlevinQuant: Panel of plots with quantification summary statistics
In alevinQC: Generate QC Reports For Alevin Output

Description Usage Arguments Value Author(s) Examples

Panel of plots with quantification summary statistics

plotAlevinQuant(
  cbTable,
  colName = "inFinalWhiteList",
  cbName = "final whitelist"
)

`cbTable`	`data.frame` (such as the `cbTable` returned by `readAlevinQC`) with collapsed barcode frequencies, the total UMI count and the number of detected genes for each cell.
`colName`	Character scalar giving the name of a logical column of `cbTable` to use for coloring the points.
`cbName`	Character scalar giving the name of the set of barcodes defined by `colName`, used for labelling the plot legend.

A ggplot object

Charlotte Soneson

alevin <- readAlevinQC(system.file("extdata/alevin_example_v0.14",
                                   package = "alevinQC"))
plotAlevinQuant(alevin$cbTable, colName = "inFinalWhiteList",
                cbName = "final whitelist")