defGR: Helper to construct GRanges with additional metadata columns.
In amplican: Automated analysis of CRISPR experiments
Description
Usage
Arguments
Value
View source: R/helpers_general.R
Description
Helper to construct GRanges with additional metadata columns.
Usage
1
2
Arguments
x
(IRanges) names(x) indicating read_id
ID
(string)
score
(numeric) scores from the alignments
strand_info
(string) Either '+', '-'
type
(string)
originally
(string) Base pairs on the amplicon.
replacement
(string) Base pairs on the read.
Value
(GRanges) Object with meta-data
amplican documentation built on Nov. 8, 2020, 11:10 p.m.
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Description Usage Arguments Value
View source: R/helpers_general.R
Description
Helper to construct GRanges with additional metadata columns.
Usage
1 2 |
Arguments
x |
( |
ID |
(string) |
score |
(numeric) scores from the alignments |
strand_info |
(string) Either '+', '-' |
type |
(string) |
originally |
(string) Base pairs on the amplicon. |
replacement |
(string) Base pairs on the read. |
Value
(GRanges) Object with meta-data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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