getReads: getReads returns the reads stored in a 'procBam' object.
In casper: Characterization of Alternative Splicing based on Paired-End Reads
Description
Usage
Arguments
Value
Methods
Examples
Description
procBam objects store reads that have been split according to
their CIGAR codes. getReads accesses these reads.
Usage
1
getReads(x)
Arguments
x
Object of class procBam
Value
RangedData object with reads stored in x.
Methods
signature(x='procBam')-
Return reads stored in x.
Examples
1
#See example in calcExp
casper documentation built on Dec. 17, 2020, 2:01 a.m.
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Description Usage Arguments Value Methods Examples
Description
procBam objects store reads that have been split according to
their CIGAR codes. getReads accesses these reads.
Usage
1 | getReads(x)
|
Arguments
x |
Object of class |
Value
RangedData object with reads stored in x.
Methods
signature(x='procBam')-
Return reads stored in
x.
Examples
1 | #See example in calcExp
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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