gapfillerInstallation: A function to download a compiled version of GapFiller
In chimera: A package for secondary analysis of fusion products
Description
Usage
Arguments
Author(s)
See Also
Examples
View source: R/denovoFusionCheck.R
Description
A function allowing the download and installation of a compiled version of GapFiller in chimera package folder.
The source code of GapFiller can be retrieved at http://sourceforge.net/projects/gapfiller/files/?source=navbar .
The paper describing the tool is Nadalin F, Vezzi F, Policriti A. GapFiller: a de novo assembly approach to fill the gap within paired reads. BMC Bioinformatics. 2012;13 Suppl 14:S8.
Usage
1
gapfillerInstallation(os=c("mac64","unix64"))
Arguments
os
The supported operating systems
Author(s)
Raffaele A Calogero
See Also
Examples
1
#gapfillerInstallation(os="mac64")
chimera documentation built on Nov. 8, 2020, 5:16 p.m.
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Description Usage Arguments Author(s) See Also Examples
View source: R/denovoFusionCheck.R
Description
A function allowing the download and installation of a compiled version of GapFiller in chimera package folder. The source code of GapFiller can be retrieved at http://sourceforge.net/projects/gapfiller/files/?source=navbar . The paper describing the tool is Nadalin F, Vezzi F, Policriti A. GapFiller: a de novo assembly approach to fill the gap within paired reads. BMC Bioinformatics. 2012;13 Suppl 14:S8.
Usage
1 | gapfillerInstallation(os=c("mac64","unix64"))
|
Arguments
os |
The supported operating systems |
Author(s)
Raffaele A Calogero
See Also
Examples
1 | #gapfillerInstallation(os="mac64")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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