Files in clusterProfiler
statistical analysis and visualization of functional profiles for genes and gene clusters

DESCRIPTION
NAMESPACE
NEWS
R
R/00-AllClasses.R R/AllGenerics.R R/DOSE.R R/GFFparser.R R/GMT.R R/accessor.R R/bitr.R R/buildGOmap.R R/clusterProfiler-package.R R/compareCluster.R R/dotplot.R R/enrichDAVID.R R/enrichGO.R R/enrichKEGG.R R/enrichMKEGG.R R/enricher.R R/go-utilities.R R/gofilter.R R/groupGO.R R/gseAnalyzer.R R/kegg-utilities.R R/plotGOgraph.R R/simplify.R R/utilities.R R/zzz.R
build
build/vignette.rds
data
data/gcSample.rda
data/kegg_species.rda
inst
inst/CITATION
inst/doc
inst/doc/clusterProfiler.R inst/doc/clusterProfiler.Rmd
inst/doc/clusterProfiler.html
inst/extdata
inst/extdata/c5.cc.v5.0.entrez.gmt
man
man/DataSet.Rd man/GSEA.Rd man/Gff2GeneTable.Rd man/KEGG_path2extid.Rd man/bitr.Rd man/bitr_kegg.Rd man/browseKEGG.Rd man/buildGOmap.Rd man/clusterProfiler-package.Rd man/compareCluster.Rd man/compareClusterResult-class.Rd man/dotplot-methods.Rd man/download_KEGG.Rd man/dropGO.Rd man/enrichDAVID.Rd man/enrichGO.Rd man/enrichKEGG.Rd man/enrichMKEGG.Rd man/enricher.Rd man/fortify.Rd man/getGOLevel.Rd man/go2ont.Rd man/go2term.Rd man/gofilter.Rd man/groupGO.Rd man/groupGOResult-class.Rd man/gseGO.Rd man/gseKEGG.Rd man/gseMKEGG.Rd man/idType.Rd man/merge_result.Rd man/plot-methods.Rd man/plotGOgraph.Rd man/plotting.clusterProfile.Rd man/read.gmt.Rd man/search_kegg_organism.Rd man/simplify-methods.Rd man/viewKEGG.Rd
tests
tests/testthat
tests/testthat.R tests/testthat/test-bitr.R
vignettes
vignettes/clusterProfiler.Rmd
vignettes/clusterProfiler.bib
vignettes/figures
vignettes/figures/browseKEGG.png
vignettes/figures/cnetplot.png
vignettes/figures/enrichMap.png
vignettes/figures/hsa04110_pathview.png
vignettes/nature.csl
clusterProfiler documentation built on June 21, 2017, 2:01 a.m.