gQTLstats: gQTLstats: computationally efficient analysis for eQTL and allied studies

computationally efficient analysis of eQTL, mQTL, dsQTL, etc.

AuthorVJ Carey <stvjc@channing.harvard.edu>
Date of publicationNone
MaintainerVJ Carey <stvjc@channing.harvard.edu>
LicenseArtistic-2.0
Version1.6.0

View on Bioconductor

Files in this package

gQTLstats/DESCRIPTION
gQTLstats/NAMESPACE
gQTLstats/R
gQTLstats/R/allS4.R gQTLstats/R/buf.R gQTLstats/R/bufferedTrans.R gQTLstats/R/cisAssocPlus.R gQTLstats/R/cisCount.R gQTLstats/R/cisEsts.R gQTLstats/R/filters.R gQTLstats/R/gmod2.R gQTLstats/R/manhW878.R gQTLstats/R/mixedVcfToSM.R gQTLstats/R/pifdr.R gQTLstats/R/plot.sensobj.thresh.R gQTLstats/R/qqStore.R gQTLstats/R/queryVCF.R gQTLstats/R/senstab.R gQTLstats/R/storeStats.R gQTLstats/R/transChunk.R
gQTLstats/build
gQTLstats/build/partial.rdb
gQTLstats/build/vignette.rds
gQTLstats/data
gQTLstats/data/bigfiltFDR.rda
gQTLstats/data/bigrawFDR.rda
gQTLstats/data/datalist
gQTLstats/data/filtFDR.rda
gQTLstats/data/hmm878.rda
gQTLstats/data/rawFDR.rda
gQTLstats/data/sensByProbe.rda
gQTLstats/data/sigInlit.rda
gQTLstats/inst
gQTLstats/inst/doc
gQTLstats/inst/doc/gQTLstats.R
gQTLstats/inst/doc/gQTLstats.Rmd
gQTLstats/inst/doc/gQTLstats.html
gQTLstats/inst/scripts
gQTLstats/inst/scripts/README.txt
gQTLstats/inst/scripts/geuvFull
gQTLstats/inst/scripts/geuvFull/gsvs.rda
gQTLstats/inst/scripts/geuvFull/runit.R
gQTLstats/inst/scripts/geuvFull/runit3.R
gQTLstats/inst/scripts/geuvFull/tg_250k.rda
gQTLstats/inst/scripts/sensByProbe
gQTLstats/inst/scripts/sensByProbe/sensanal2.R
gQTLstats/inst/scripts/sensBySNP
gQTLstats/inst/scripts/sensBySNP/bysnpBat.R
gQTLstats/inst/unitTests
gQTLstats/inst/unitTests/test_gQTLstats.R
gQTLstats/inst/vcf
gQTLstats/inst/vcf/GLdemo.vcf
gQTLstats/inst/vcf/README.txt
gQTLstats/inst/vcf/c20exch.vcf.gz
gQTLstats/inst/vcf/c20exch.vcf.gz.tbi
gQTLstats/inst/vcf/lit20.vcf.gz
gQTLstats/inst/vcf/lit20.vcf.gz.tbi
gQTLstats/inst/vcf/litv.vcf.gz
gQTLstats/inst/vcf/litv.vcf.gz.tbi
gQTLstats/inst/vcf/mixedVcfToSM.R
gQTLstats/inst/vcf/polytype.vcf
gQTLstats/inst/vcf/polytypeSNV.vcf
gQTLstats/inst/vcf/small_1.vcf.gz
gQTLstats/inst/vcf/small_1.vcf.gz.tbi
gQTLstats/man
gQTLstats/man/FDRsupp-class.Rd gQTLstats/man/TransStore-class.Rd gQTLstats/man/TransStore.Rd gQTLstats/man/cisAssoc.Rd gQTLstats/man/clipPCs.Rd gQTLstats/man/directPlot.Rd gQTLstats/man/enumerateByFDR.Rd gQTLstats/man/eqBox2.Rd gQTLstats/man/filtFDR.Rd gQTLstats/man/gQTLs.Rd gQTLstats/man/gQTLstats-package.Rd gQTLstats/man/hmm878.Rd gQTLstats/man/manhWngr.Rd gQTLstats/man/mixedVCFtoSnpMatrix.Rd gQTLstats/man/pifdr.Rd gQTLstats/man/qqStore.Rd gQTLstats/man/queryVCF.Rd gQTLstats/man/senstab.Rd gQTLstats/man/setFDRfunc.Rd gQTLstats/man/storeToStats.Rd gQTLstats/man/transAssoc.Rd gQTLstats/man/txsPlot.Rd
gQTLstats/tests
gQTLstats/tests/test-all.R
gQTLstats/vignettes
gQTLstats/vignettes/gQTLstats.Rmd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.