API for geNetClassifier
Classify diseases and build associated gene networks using gene expression profiles

Global functions
GeNetClassifierReturn Man page
GeNetClassifierReturn-class Man page
GeneralizationError Man page
GeneralizationError-class Man page
GenesNetwork Man page
GenesNetwork-class Man page
GenesRanking Man page
GenesRanking-class Man page
PEB Source code
SV.dif Source code
assignment.conditions Source code
calculateGenesRanking Man page Source code
calculateOrder Source code
configurePlotOutput Source code
correlation.net Source code
create.hypothesis Source code
cvNumbers Source code
cvSplitSamples Source code
difMean Source code
edges,GenesNetwork-method Man page Man page
externalValidation.probMatrix Man page Source code
externalValidation.stats Man page Source code
extractGeneLabels Source code
extractGenes,GenesRanking-method Man page
gClasses Man page
gClasses,GenesRanking-method Man page Man page
gClasses-methods Man page
geNetClassifier Man page Source code
geNetClassifier-package Man page
gene.select Source code
geneSymbols Man page
genesDetails Man page
genesDetails,GenesRanking-method Man page Man page
genesDetails-methods Man page
genesDetails.GenesRanking Man page
getEdges Man page
getEdges,GenesNetwork-method Man page Man page
getEdges-methods Man page
getNodes Man page
getNodes,GenesNetwork-method Man page Man page
getNodes-methods Man page
getNumEdges Man page
getNumEdges,GenesNetwork-method Man page Man page
getNumEdges-methods Man page
getNumNodes Man page
getNumNodes,GenesNetwork-method Man page Man page
getNumNodes-methods Man page
getRanking Man page
getRanking,GenesRanking-method Man page Man page
getRanking-methods Man page
getRanking.GenesRanking Man page
getSlots,GeNetClassifierReturn-method Man page
getSubNetwork Man page
getSubNetwork,GeNetClassifierReturn-method Man page
getSubNetwork,GenesNetwork-method Man page Man page
getSubNetwork,NULL-method Man page
getSubNetwork,list-method Man page
getSubNetwork-methods Man page
getTopRanking Man page
getTopRanking,GenesRanking-method Man page Man page
getTopRanking-methods Man page
getTopRanking.GenesRanking Man page
initialize,GeNetClassifierReturn-method Man page
initialize,GeneralizationError-method Man page
initialize,GenesNetwork-method Man page
initialize,GenesRanking-method Man page
interaction.net Source code
iqr.filter Source code
leukemiasClassifier Man page
minimumDiff Source code
nGenes,GenesRanking-method Man page
names,GeNetClassifierReturn-method Man page
network2txt Man page
network2txt,GenesNetwork-method Man page
network2txt,list-method Man page
network2txt-methods Man page
nodes,GenesNetwork-method Man page Man page
numEdges,GenesNetwork-method Man page Man page
numGenes Man page
numGenes,GenesRanking-method Man page
numGenes-methods Man page
numNodes,GenesNetwork-method Man page Man page
numSignificantGenes Man page
numSignificantGenes,GenesRanking-method Man page Man page
numSignificantGenes-methods Man page
numSignificantGenes.GenesRanking Man page
overview Man page
overview,GeNetClassifierReturn-method Man page Man page
overview,GeneralizationError-method Man page Man page
overview,GenesNetwork-method Man page Man page
overview,GenesRanking-method Man page Man page
overview-methods Man page
plot,GeNetClassifierReturn-method Man page
plot,GenesNetwork-method Man page
plot,GenesRanking,missing-method Man page
plot,GenesRanking-method Man page
plot.GeNetClassifierReturn Man page Source code
plot.GenesNetwork Man page Source code
plot.GenesRanking Man page Source code
plotAssignments Man page Source code
plotDiscriminantPower Man page Source code
plotErrorNumGenes Source code
plotExpressionProfiles Man page Source code
plotGeNetClassifierReturn Man page Source code
plotGeNetClassifierReturn,GeNetClassifierReturn-method Man page
plotGenesRanking Man page
plotNetwork Man page Source code
plotNetwork,GenesNetwork-method Man page
queryGeNetClassifier Man page Source code
queryResultCheck Source code
querySummary Man page Source code
remove.redundancy Source code
setProperties Man page
setProperties,GenesRanking-method Man page Man page
setProperties-methods Man page
setProperties.GenesRanking Man page
show,GeNetClassifierReturn-method Man page
show,GeneralizationError-method Man page
show,GenesNetwork-method Man page
show,GenesRanking-method Man page
svmCrossVal Source code
geNetClassifier documentation built on May 2, 2018, 4:20 a.m.