Man pages for genefilter
genefilter: methods for filtering genes from high-throughput experiments
| Anova | A filter function for Analysis of Variance |
| coxfilter | A filter function for univariate Cox regression. |
| cv | A filter function for the coefficient of variation. |
| dist2 | Calculate an n-by-n matrix by applying a function to all... |
| eSetFilter | A function to filter an eSet object |
| filtered_p | Compute and adjust p-values, with filtering |
| filterfun | Creates a first FALSE exiting function from the list of... |
| filter_volcano | Volcano plot for overall variance filtering |
| findLargest | Find the Entrez Gene ID corresponding to the largest... |
| gapFilter | A filter to select genes based on there being a gap. |
| genefilter | A function to filter genes. |
| genefinder | Finds genes that have similar patterns of expression. |
| genescale | Scales a matrix or vector. |
| half.range.mode | Mode estimation for continuous data |
| kappa_p | Compute proportionality constant for fold change bound. |
| kOverA | A filter function for k elements larger than A. |
| maxA | A filter function to filter according to the maximum. |
| nsFilter | Filtering of Features in an ExpressionSet |
| pOverA | A filter function to filter according to the proportion of... |
| rejection_plot | Plot rejections vs. p-value cutoff |
| rowFtests | t-tests and F-tests for rows or columns of a matrix |
| rowpAUCs | Rowwise ROC and pAUC computation |
| rowROC-class | Class "rowROC" |
| rowSds | Row variance and standard deviation of a numeric array |
| shorth | A location estimator based on the shorth |
| tdata | A small test dataset of Affymetrix Expression data. |
| ttest | A filter function for a t.test |
