admixture: admixture - estimate admixture components using supervised...
In genotypeeval: QA/QC of a gVCF or VCF file
Description
Usage
Arguments
Value
Description
admixture - estimate admixture components using supervised ADMIXTURE algorithm.
Usage
1
admixture(x, vr.ref)
Arguments
x
myvcf of interest
vr.ref
reference file for admixture estimation (uses subset of 1000 Genomes)
Value
List, name of metric (admixture), list of true false values if passed, ancestry coefficient values
genotypeeval documentation built on Nov. 8, 2020, 5:03 p.m.
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Description Usage Arguments Value
Description
admixture - estimate admixture components using supervised ADMIXTURE algorithm.
Usage
1 | admixture(x, vr.ref)
|
Arguments
x |
myvcf of interest |
vr.ref |
reference file for admixture estimation (uses subset of 1000 Genomes) |
Value
List, name of metric (admixture), list of true false values if passed, ancestry coefficient values
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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