percentInTarget: percent in target range read depth For 15 to 60 for 30x (50...
In genotypeeval: QA/QC of a gVCF or VCF file
Description
Usage
Arguments
Value
Description
percent in target range read depth
For 15 to 60 for 30x (50 percent to 200 percent)
Usage
1
percentInTarget(x, target, percent.target)
Arguments
x
myvcf of interest
target
Coverage target
percent.target
From params, the percent required to be in target
Value
list with name, logical (passed or not), numeric percent in target range
genotypeeval documentation built on Nov. 8, 2020, 5:03 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
percent in target range read depth For 15 to 60 for 30x (50 percent to 200 percent)
Usage
1 | percentInTarget(x, target, percent.target)
|
Arguments
x |
myvcf of interest |
target |
Coverage target |
percent.target |
From params, the percent required to be in target |
Value
list with name, logical (passed or not), numeric percent in target range
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.