API for idr2d
Irreproducible Discovery Rate for Genomic Interactions Data
| Global functions | |
|---|---|
| .onLoad | Source code |
| calculate_midpoint_distance1d | Man page Source code |
| calculate_midpoint_distance2d | Man page Source code |
| calculate_relative_overlap1d | Man page Source code |
| calculate_relative_overlap2d | Man page Source code |
| chiapet | Man page |
| chipseq | Man page |
| determine_anchor_overlap | Man page Source code |
| determine_block_size | Source code |
| draw_hic_contact_map | Man page Source code |
| draw_idr_distribution_histogram | Man page Source code |
| draw_rank_idr_scatterplot | Man page Source code |
| draw_value_idr_scatterplot | Man page Source code |
| establish_bijection | Man page Source code |
| establish_bijection1d | Man page Source code |
| establish_bijection2d | Man page Source code |
| establish_overlap1d | Man page Source code |
| establish_overlap2d | Man page Source code |
| estimate_idr | Man page Source code |
| estimate_idr1d | Man page Source code |
| estimate_idr2d | Man page Source code |
| estimate_idr2d_hic | Man page Source code |
| hic | Man page |
| parse_hic_pro_matrix | Man page Source code |
| parse_juicer_matrix | Man page Source code |
| preprocess | Man page Source code |
| pretty_print_block_size | Source code |
| pretty_print_reads | Source code |
| print.idr2d_result_summary | Source code |
| remove_nonstandard_chromosomes1d | Man page Source code |
| remove_nonstandard_chromosomes2d | Man page Source code |
| summary.idr2d_hic_result | Source code |
| summary.idr2d_result | Source code |
