isomiRs: Analyze isomiRs and miRNAs from small RNA-seq

Characterization of miRNAs and isomiRs, clustering and differential expression.

AuthorLorena Pantano, Georgia Escaramis
Date of publicationNone
MaintainerLorena Pantano <lorena.pantano@gmail.com>
LicenseMIT + file LICENSE
Version1.2.0

View on Bioconductor

Files in this package

isomiRs/.travis.yml
isomiRs/DESCRIPTION
isomiRs/LICENSE
isomiRs/NAMESPACE
isomiRs/NEWS
isomiRs/R
isomiRs/R/AllClasses.R isomiRs/R/AllGenerics.R isomiRs/R/AllMethods.R isomiRs/R/PLSDA.R isomiRs/R/internal.R isomiRs/R/isomiRs.R isomiRs/R/mirData-data.R isomiRs/R/targets.R
isomiRs/README.md
isomiRs/TODO.md
isomiRs/build
isomiRs/build/vignette.rds
isomiRs/data
isomiRs/data/datalist
isomiRs/data/isoExample.rda
isomiRs/data/mirData.rda
isomiRs/inst
isomiRs/inst/doc
isomiRs/inst/doc/isomiRs-intro.R
isomiRs/inst/doc/isomiRs-intro.Rnw
isomiRs/inst/doc/isomiRs-intro.pdf
isomiRs/inst/extra
isomiRs/inst/extra/sample1.mirna
isomiRs/inst/extra/sample2.mirna
isomiRs/inst/unitTests
isomiRs/inst/unitTests/test_singleFunctions.R
isomiRs/man
isomiRs/man/IsomirDataSeq.Rd isomiRs/man/IsomirDataSeqFromFiles.Rd isomiRs/man/counts.Rd isomiRs/man/find_targets.Rd isomiRs/man/isoCounts.Rd isomiRs/man/isoDE.Rd isomiRs/man/isoNetwork.Rd isomiRs/man/isoNorm.Rd isomiRs/man/isoPLSDA.Rd isomiRs/man/isoPLSDAplot.Rd isomiRs/man/isoPlot.Rd isomiRs/man/isoPlotNet.Rd isomiRs/man/isoPlotPosition.Rd isomiRs/man/isoSelect.Rd isomiRs/man/isoTop.Rd isomiRs/man/mirData.Rd
isomiRs/tests
isomiRs/tests/runTests.R
isomiRs/vignettes
isomiRs/vignettes/isomiRs-intro.Rnw
isomiRs/vignettes/isomirs.bib

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.