isoAnnotate: Annotate the rawData of the IsomirDataSeq object
In isomiRs: Analyze isomiRs and miRNAs from small RNA-seq

Get the sequence and the name information for each isomiR, and the importance value (isomir_reads/mirna_reads) for each sample.

1	isoAnnotate(ids)

ids

Object of class IsomirDataSeq.

edit_mature_position represents the position at the mature sequence + nucleotide at reference + nucleotide at isomiR.

data.frame with the sequence, isomir name, and importance for each sample and isomiR.

1 2	data(mirData) head(isoAnnotate(mirData))

isomiRs documentation built on Jan. 31, 2021, 2 a.m.

isomiRs index

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