isoTop: Heatmap of the top expressed isomiRs
In isomiRs: Analyze isomiRs and miRNAs from small RNA-seq
Description
Usage
Arguments
Value
Examples
Description
This function creates a heatmap with the top N
isomiRs/miRNAs. It uses the matrix under counts(ids)
to get the top expressed isomiRs/miRNAs using the average
expression value
and plot a heatmap with the raw counts for each sample.
Usage
1
isoTop(ids, top = 20)
Arguments
ids
Object of class IsomirDataSeq.
top
Number of isomiRs/miRNAs used.
Value
PCA of the top expressed miRNAs
Examples
1
2
isomiRs documentation built on Jan. 31, 2021, 2 a.m.
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Description Usage Arguments Value Examples
Description
This function creates a heatmap with the top N
isomiRs/miRNAs. It uses the matrix under counts(ids)
to get the top expressed isomiRs/miRNAs using the average
expression value
and plot a heatmap with the raw counts for each sample.
Usage
1 | isoTop(ids, top = 20)
|
Arguments
ids |
Object of class IsomirDataSeq. |
top |
Number of isomiRs/miRNAs used. |
Value
PCA of the top expressed miRNAs
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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