resiplot: Residual plot for Microarray Experiment

In maanova: Tools for analyzing Micro Array experiments

Description

This is the function to plot the residuals versus fitted value figure. Two channels, e.g., red and green, are drawn in seperate figures.

Usage

resiplot(madata, anovaobj, header, xlab, ylab)

Arguments

madata	An object of class madata.
anovaobj	An object of class maanova, which is the output from fitmaanova.
header	Optional. The title of the figure. The default figure title will be "Residual vs. Yhat plot".
xlab	Optional. The xlab of the figure. The default will be "Yhat".
ylab	Optional. The ylab of the figure. The default will be "Residual".

Author(s)

Hao Wu

Examples

# load abf1 data
data(abf1)
## Not run: 
fit.full.mix <- fitmaanova(abf1, formula = ~Strain+Sample, 
   random = ~Sample)
resiplot(abf1, fit.full.mix)

## End(Not run)

maanova documentation built on Nov. 8, 2020, 8:21 p.m.