PairContrast: Pairwise comparison matrix
In maanova: Tools for analyzing Micro Array experiments

Description Usage Arguments Value Author(s) Examples

It returns all possible pairwise comparison.

1	PairContrast(n)

`n`	Number of levels in test term.

res

All pairwise comparison matrix.

Hyuna Yang

# load in abf1 data
data(abf1)
## Not run: 
fit.full.mix <- fitmaanova(abf1, formula = ~Strain+Sample, 
   random = ~Sample)
ftest.all = matest(abf1, fit.full.mix, test.method=c(1,1),
    shuffle.method="sample", term="Strain", n.perm= 100)
C = PairContrast(3)
ftest.pair = matest(abf1, fit.full.mix, Contrast = C, 
   term="Strain", n.perm=100)
## End(Not run)