API for mmnet
A metagenomic pipeline for systems biology
| Global functions | |
|---|---|
| RefDbcache | Man page |
| anno | Man page |
| checkMgrastMetagenome | Man page Source code |
| constructMetabolicNetwork | Man page Source code |
| constructSSN | Man page Source code |
| delMgrastInbox | Man page Source code |
| differentialAnalyzeNet | Source code |
| differentialAnalyzeNet | Man page |
| estimateAbundance | Man page Source code |
| extract_metadata | Source code |
| generateMgrastWebkey | Man page Source code |
| generateMgrastWebsession | Man page Source code |
| getKOPathwayInfo | Man page Source code |
| getMgrastAnnotation | Man page Source code |
| listMgrastInbox | Man page Source code |
| listMgrastProject | Man page Source code |
| loadMetabolicData | Man page Source code |
| loginMgrast | Man page Source code |
| make_biom | Source code |
| mmnet-package | Man page |
| preprocessKOMetabolites | Man page Source code |
| read_biom | Source code |
| saveMetabolicData | Man page Source code |
| showMetagenomicNet | Man page Source code |
| submitMgrastJob | Man page Source code |
| topologicalAnalyzeNet | Man page Source code |
| updateKEGGPathway | Man page Source code |
| uploadMgrast | Man page Source code |
| validbiom | Source code |
| write_biom | Source code |
