preprocessKOMetabolites: Preprocessing of KO's (enzyme's) metabolites
In mmnet: A metagenomic pipeline for systems biology
Description
Usage
Arguments
Details
Value
See Also
View source: R/preprocessKOMetabolites.R
Description
This function preprocess the KO information to delete the redundant metabolites
Usage
1
preprocessKOMetabolites(ko.info)
Arguments
ko.info
KO information, can be obtained by getKOPathwayInfo
Details
When we get the KO information first, there are reversible reaction, duplicate KOs and metabolites. This function merge all the KO information together and delete the redundant information.
Value
list, is composed of KO, substrates and products
See Also
getKOPathwayInfo, updateKEGGPathway
mmnet documentation built on May 31, 2017, 3:25 p.m.
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Description Usage Arguments Details Value See Also
View source: R/preprocessKOMetabolites.R
Description
This function preprocess the KO information to delete the redundant metabolites
Usage
1 | preprocessKOMetabolites(ko.info)
|
Arguments
ko.info |
KO information, can be obtained by |
Details
When we get the KO information first, there are reversible reaction, duplicate KOs and metabolites. This function merge all the KO information together and delete the redundant information.
Value
list, is composed of KO, substrates and products
See Also
getKOPathwayInfo, updateKEGGPathway
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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