getTermRelations: Returns set of terms that are in defined relation with term...
In ontoCAT: Ontology traversal and search
Description
Usage
Arguments
Value
Author(s)
References
See Also
Description
Returns set of terms that are in defined relation with the term of interest
Usage
1
getTermRelations(object1,object2,relation)
Arguments
object1
instance of the Ontology class
object2
instance of the OntologyTerm class
relation
relation name
Value
Returns set of ontology term's synonymss if there are some
Author(s)
Natalja Kurbatova
References
Adamusiak T, Burdett T, van der Velde K J, Abeygunawardena N, Antonakaki D, Parkinson H and Swertz M: OntoCAT – a simpler way to access ontology resources. Available from Nature Precedings http://dx.doi.org/10.1038/npre.2010.4666.1 (2010)
Malone J, Holloway E, Adamusiak T, Kapushesky M, Zheng J, Kolesnikov N, Zhukova A, Brazma A, Parkinson H: Modeling Sample Variables with an Experimental Factor Ontology. Bioinformatics 2010, 26(8):1112–1118
Experimental Factor Ontology http://www.ebi.ac.uk/efo
Ontology Common API Tasks java library http://www.ontocat.org
Java sources and javadocs: http://sourceforge.net/projects/ontocat/files/
See Also
Ontology and OntologyTerm
ontoCAT documentation built on Nov. 17, 2017, 12:06 p.m.
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Description Usage Arguments Value Author(s) References See Also
Description
Returns set of terms that are in defined relation with the term of interest
Usage
1 | getTermRelations(object1,object2,relation)
|
Arguments
object1 |
instance of the |
object2 |
instance of the |
relation |
relation name |
Value
Returns set of ontology term's synonymss if there are some
Author(s)
Natalja Kurbatova
References
Adamusiak T, Burdett T, van der Velde K J, Abeygunawardena N, Antonakaki D, Parkinson H and Swertz M: OntoCAT – a simpler way to access ontology resources. Available from Nature Precedings http://dx.doi.org/10.1038/npre.2010.4666.1 (2010)
Malone J, Holloway E, Adamusiak T, Kapushesky M, Zheng J, Kolesnikov N, Zhukova A, Brazma A, Parkinson H: Modeling Sample Variables with an Experimental Factor Ontology. Bioinformatics 2010, 26(8):1112–1118
Experimental Factor Ontology http://www.ebi.ac.uk/efo
Ontology Common API Tasks java library http://www.ontocat.org
Java sources and javadocs: http://sourceforge.net/projects/ontocat/files/
See Also
Ontology and OntologyTerm
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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