panel.xyplot.flowPlate: Lattice-flowViz style panel function for flowPlate xyplot.

In plateCore: Statistical tools and data structures for plate-based flow cytometry

Description

This function should not be called directly, use xyplot.

Usage

panel.xyplot.flowPlate(x, 
				frames,
				channel.x, channel.y,
				channel.x.name, channel.y.name, 
				filter = NULL,
				filterResults = NULL,
				displayFilter = TRUE,
				pch, smooth,
				wellAnnotation = NULL,
				col = superpose.symbol$col,
				...)

Arguments

x	character
frames	flowFrames
channel.x	xyplot channel.x parameter
channel.y	xyplot channel.y parameter
channel.x.name	xyplot channel.x.name parameter
channel.y.name	xyplot channel.y.name parameter
filter	xyplot filter parameter
filterResults	xyplot filterResults parameter
displayFilter	xyplot displayFilter parameter
pch	xyplot pch parameter
smooth	xyplot smooth parameter
wellAnnotation	wellAnnotation data.frame
col	xyplot col parameter
...	optional arguments

Author(s)

Errol Strain

See Also

See Also xyplot

Examples

library(plateCore)
data(plateCore)

# Create a flowPlate from the sample data in plateCore
fp <- flowPlate(pbmcPlate,wellAnnotation,plateName="P1")

## Create a rectangle filter
rectGate <- rectangleGate("FSC-H"=c(300,700),"SSC-H"=c(50,400))

xyplot(`SSC-H` ~ `FSC-H` | as.factor(name), 
	fp[1], smooth=FALSE, filter=rectGate, displayFilter=FALSE)

plateCore documentation built on May 6, 2019, 2:41 a.m.