plateCore: Statistical tools and data structures for plate-based flow cytometry

Provides basic S4 data structures and routines for analyzing plate based flow cytometry data.

AuthorErrol Strain, Florian Hahne, and Perry Haaland
Date of publicationNone
MaintainerErrol Strain <estrain@gmail.com>
LicenseArtistic-2.0
Version1.32.0
http://www.bioconductor.org

View on Bioconductor

Files in this package

plateCore/DESCRIPTION
plateCore/NAMESPACE
plateCore/R
plateCore/R/AllClasses.R plateCore/R/AllGenerics.R plateCore/R/densityplotFlowPlate.R plateCore/R/flowPlate-accessors.R plateCore/R/flowPlate-plotting.R plateCore/R/flowPlate-utilities.R plateCore/R/utilities.R plateCore/R/xyplotFlowPlate.R
plateCore/build
plateCore/build/vignette.rds
plateCore/data
plateCore/data/plateCore.rda
plateCore/inst
plateCore/inst/doc
plateCore/inst/doc/plateCoreVig.R
plateCore/inst/doc/plateCoreVig.Rnw
plateCore/inst/doc/plateCoreVig.pdf
plateCore/man
plateCore/man/Subset-methods.Rd plateCore/man/applyControlGates-methods.Rd plateCore/man/compensate-methods.Rd plateCore/man/compensationSet.Rd plateCore/man/densityplot-methods.Rd plateCore/man/fixAutoFl-methods.Rd plateCore/man/flowPlate-class.Rd plateCore/man/flowPlate-method.Rd plateCore/man/fpbind-methods.Rd plateCore/man/getGroups-methods.Rd plateCore/man/gutterPlot-methods.Rd plateCore/man/mfiPlot-methods.Rd plateCore/man/on-methods.Rd plateCore/man/panel.densityplot.flowPlate.Rd plateCore/man/panel.xyplot.flowPlate.Rd plateCore/man/pbmcPlate.Rd plateCore/man/plateCore-package.Rd plateCore/man/plateSet-methods.Rd plateCore/man/plotPlate-methods.Rd plateCore/man/prepanel.densityplot.flowPlate.Rd plateCore/man/prepanel.xyplot.flowPlate.Rd plateCore/man/setControlGates-methods.Rd plateCore/man/summaryStats-methods.Rd plateCore/man/wellAnnotation-methods.Rd plateCore/man/xyplot-methods.Rd
plateCore/paper
plateCore/paper/EdResponse.doc
plateCore/paper/ResponseToReviewers.doc
plateCore/paper/ResponseToReviewers.pdf
plateCore/paper/analysisSteps.odg
plateCore/paper/analysisSteps.pdf
plateCore/paper/bioconductorReview.txt
plateCore/paper/fjVSr.emf
plateCore/paper/fjVSr.pdf
plateCore/paper/fjVSr.svg
plateCore/paper/fjVSr2.svg
plateCore/paper/fjVSr3.pdf
plateCore/paper/fjVSrDf.csv
plateCore/paper/isoplot.pdf
plateCore/paper/isoplot.svg
plateCore/paper/mfiRatio.pdf
plateCore/paper/mfiRatio.svg
plateCore/paper/mfiRatio2.pdf
plateCore/paper/mfiRatio2.svg
plateCore/paper/mfiRatioB.pdf
plateCore/paper/outline.aux
plateCore/paper/outline.bbl
plateCore/paper/outline.bib
plateCore/paper/outline.blg
plateCore/paper/outline.tex
plateCore/paper/outlineOLD.Rnw
plateCore/paper/percentagesRandFJ.csv
plateCore/paper/plateCore.doc
plateCore/paper/plateCoreReviewer1.doc
plateCore/paper/plateCoreReviewer2.doc
plateCore/paper/rVSfjByFL.emf
plateCore/paper/rVSfjByFL.pdf
plateCore/paper/rVSfjByFL.svg
plateCore/paper/replicate.emf
plateCore/paper/replicate.pdf
plateCore/paper/replicate.svg
plateCore/vignettes
plateCore/vignettes/expDens.pdf
plateCore/vignettes/plateCoreVig.Rnw

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