Read in matching transcription factor target gene pairs.

Share:

Description

In case the user is able to provide a file with transcription factor - target gene matches (e.g. from TRANSFAC database) this function can read in the information. The file needs to be a txt file with first column transcription factors and second column target gene symbols without a header.

Usage

1
readTFtargets(data_omics, TF_target_path)

Arguments

data_omics

OmicsData object.

TF_target_path

path of txt file containing the transcription factor target gene information as specified above.

Value

data frame with user-specified TF target gene information.

Want to suggest features or report bugs for rdrr.io? Use the GitHub issue tracker.