qpcrBatch-class: Class qpcrBatch

In qpcrNorm: Data-driven normalization strategies for high-throughput qPCR data.

Description

This is a class representation for qPCR expression data.

Objects from the Class

Objects can be created using the function readQpcr or readQpcrBatch to read in raw data from a text file(s). Objects can also be created by using new("qpcrBatch", ...).

Slots

geneNames:

Character vector denoting gene or primer pair names.

plateIndex:

Character vector denoting plate indices.

exprs:

Matrix of qPCR expression values, normally these are the Ct values.

normalized:

Logical value, TRUE if expression data has been normalized.

normGenes:

Character vector of genes used by the normalization algorithm.

Methods

No methods have yet been defined with class "qpcrBatch" in the signature.

Note

This class is better describe in the vignette.

Author(s)

Jess Mar [e-mail]

Examples

## load example data 
data(qpcrBatch.object)
class(qpcrBatch.object)

qpcrNorm documentation built on Nov. 8, 2020, 4:54 p.m.