normQpcrHouseKeepingGenes: Function for Housekeeping Gene Normalization of qPCR Data.
In qpcrNorm: Data-driven normalization strategies for high-throughput qPCR data.
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
Implements housekeeping gene normalization for a qpcrBatch object.
Usage
1
normQpcrHouseKeepingGenes(qBatch, hkeep.genes)
Arguments
qBatch
A qpcrBatch object to be normalized.
hkeep.genes
Character vector, specifying which housekeeping genes to be used for normalization.
Details
The names in hkeep.genes must be a subset of the gene or primer pair names slot in the qpcrBatch object.
Value
A qpcrBatch object, the normalized slot is now set at TRUE.
Author(s)
Jess Mar jess@jimmy.harvard.edu
See Also
normQpcrQuantile, normQpcrRankInvariant
Examples
1
2
data(qpcrBatch.object)
mynormHK.data <- normQpcrHouseKeepingGenes(qpcrBatch.object, c("Gpx4"))
qpcrNorm documentation built on Nov. 8, 2020, 4:54 p.m.
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Description Usage Arguments Details Value Author(s) See Also Examples
Description
Implements housekeeping gene normalization for a qpcrBatch object.
Usage
1 | normQpcrHouseKeepingGenes(qBatch, hkeep.genes)
|
Arguments
qBatch |
A |
hkeep.genes |
Character vector, specifying which housekeeping genes to be used for normalization. |
Details
The names in hkeep.genes must be a subset of the gene or primer pair names slot in the qpcrBatch object.
Value
A qpcrBatch object, the normalized slot is now set at TRUE.
Author(s)
Jess Mar jess@jimmy.harvard.edu
See Also
normQpcrQuantile, normQpcrRankInvariant
Examples
1 2 | data(qpcrBatch.object)
mynormHK.data <- normQpcrHouseKeepingGenes(qpcrBatch.object, c("Gpx4"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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