The package contains functions to perform normalization of high-throughput qPCR data. Basic functions for processing raw Ct data plus functions to generate diagnostic plots are also available.
|Date of publication||None|
|Maintainer||Jessica Mar <firstname.lastname@example.org>|
|License||LGPL (>= 2)|
calcCV: Calculates the Average Gene-Specific Coefficient of Variation
ctQc: Quality Control Filter for Replicate Ct Values
matrixByPlate: Internal function to reorganize qPCR data into a rectangular...
normQpcrHouseKeepingGenes: Function for Housekeeping Gene Normalization of qPCR Data.
normQpcrQuantile: Function for Quantile Normalization of qPCR Data.
normQpcrRankInvariant: Function for Rank-Invariant Set Normalization for qPCR Data.
plotVarMean: Constructs scatter plot to compare the effects of two...
qpcrBatch-class: Class qpcrBatch
qpcrBatch.object: qpcrBatch instance qpcrBatch.object
readQpcr: Data Input Function for a Single qPCR Experiment.
readQpcrBatch: Data Input Function for a Batch of qPCR Experiments.
writeQpcr: Writes qpcrBatch object out to a File.