Plot per Base GC Content by Position

Description

plotGC plots the GC proportion by position.

Usage

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  plotGC(obj)

Arguments

obj

an S4 object of class that inherits from SequenceSummary (either FASTASummary or FASTQSummary) from readSeqFile.

Author(s)

Vince Buffalo <vsbuffalo@ucdavis.edu>

See Also

gcPlot

Examples

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## Not run: 
  ## Load a FASTQ file, with sequence hashing.
  s.fastq <- readSeqFile(system.file('extdata', 'test.fastq', package='qrqc'))

  ## Plot Qualities
  plotGC(s.fastq)

## End(Not run)

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