plotSeqLengths: Plot Histogram of Sequence Lengths
In qrqc: Quick Read Quality Control
Description
Usage
Arguments
Author(s)
See Also
Examples
Description
plotSeqLengths plots histogram of sequence lengths.
Usage
1
plotSeqLengths(obj)
Arguments
obj
an S4 object of class that inherits from SequenceSummary (either
FASTASummary or FASTQSummary) from
readSeqFile.
Author(s)
Vince Buffalo <vsbuffalo@ucdavis.edu>
See Also
Examples
1
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## Not run:
## Load a FASTQ file, with sequence hashing.
s.fastq <- readSeqFile(system.file('extdata', 'test.fastq', package='qrqc'))
## Plot Qualities
plotSeqLengths(s.fastq)
## End(Not run)
qrqc documentation built on Nov. 8, 2020, 7:03 p.m.
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Description Usage Arguments Author(s) See Also Examples
Description
plotSeqLengths plots histogram of sequence lengths.
Usage
1 | plotSeqLengths(obj)
|
Arguments
obj |
an S4 object of class that inherits from |
Author(s)
Vince Buffalo <vsbuffalo@ucdavis.edu>
See Also
Examples
1 2 3 4 5 6 7 8 | ## Not run:
## Load a FASTQ file, with sequence hashing.
s.fastq <- readSeqFile(system.file('extdata', 'test.fastq', package='qrqc'))
## Plot Qualities
plotSeqLengths(s.fastq)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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