Event-class: SBML type "Event"

In rsbml: R support for SBML, using libsbml

Description

Description of a instantaneous, discontinuous change in the model state.

Instantiation

Objects can be created by calls of the form new("Event", ...).

Slots

id:

Object of class "character" uniquely identifying this component.

name:

Object of class "character" naming this component.

trigger:

Object of class "expression" that evaluates to TRUE when the event is to be fired.

eventDelay:

Object of class "expression" that evaluates to the time until execution of this event after it has been fired.

timeUnits:

Object of class "character" identifying the units of the delay.

eventAssignments:

Object of class "list" containing EventAssignments that are performed at execution.

useValuesFromTriggerTime:

Object of class "logical". If FALSE, the event is evaluated after the delay, rather than when the event is executed.

metaId:

Object of class "character" that is an XML ID "described" by an RDF resource. This links an SBML element to an RDF resource. RDF may appear anywhere in an SBML element, but is usually placed inside the annotation element.

notes:

Object of class "character" containing user-readable XHTML notes about an element.

annotation:

Object of class "character" containing additional machine-readable information about an element, usually as RDF, such as BioPAX. This is where application-specific data belongs.

cvTerms:

Object of class "list" containing instances of CVTerm associated with this element.

sboTerm:

Object of class "integer" identifying a term in the Systems Biology Ontology (SBO).

Extends

Class "SBase", directly.

Methods

id

signature(object = "Event"): gets the id slot

id<-

signature(object = "Event"): sets the id slot

name

signature(object = "Event"): gets the name slot

name<-

signature(object = "Event"): sets the name slot

timeUnits

signature(object = "Event"): gets the timeUnits slot

timeUnits<-

signature(object = "Event"): sets the timeUnits slot

eventDelay

signature(x = "Event"): ...

eventDelay<-

signature(object = "Event"): sets the delay slot

eventAssignments

signature(object = "Event"): gets the eventAssignments slot

eventAssignments<-

signature(object = "Event"): sets the eventAssignments slot

trigger

signature(object = "Event"): gets the trigger slot

trigger<-

signature(object = "Event"): sets the trigger slot

Author(s)

Michael Lawrence

References

http://sbml.org/documents/

rsbml documentation built on Nov. 8, 2020, 8:09 p.m.