KineticLaw-class: SBML type "KineticLaw"

In rsbml: R support for SBML, using libsbml

Description

Describes the rate of a Reaction.

Instantiation

Objects can be created by calls of the form new("KineticLaw", ...).

Slots

math:

Object of class "expression" defining the rate of the reaction.

parameters:

Object of class "list" containing Parameters that may be used in math. The names of the list correspond to the IDs of the elements.

timeUnits:

Object of class "character" indicating the units for time.

substanceUnits:

Object of class "character" indicating the units for substance.

metaId:

Object of class "character" that is an XML ID "described" by an RDF resource. This links an SBML element to an RDF resource. RDF may appear anywhere in an SBML element, but is usually placed inside the annotation element.

notes:

Object of class "character" containing user-readable XHTML notes about an element.

annotation:

Object of class "character" containing additional machine-readable information about an element, usually as RDF, such as BioPAX. This is where application-specific data belongs.

cvTerms:

Object of class "list" containing instances of CVTerm associated with this element.

sboTerm:

Object of class "integer" identifying a term in the Systems Biology Ontology (SBO).

Extends

Class "SBase", directly.

Methods

math

signature(object = "KineticLaw"): gets the math slot

math<-

signature(object = "KineticLaw"): sets the math slot

substanceUnits

signature(object = "KineticLaw"): gets the substanceUnits slot

substanceUnits<-

signature(object = "KineticLaw"): sets the substanceUnits slot

timeUnits

signature(object = "KineticLaw"): gets the timeUnits slot

timeUnits<-

signature(object = "KineticLaw"): sets the timeUnits slot

parameters

signature(object = "KineticLaw"): gets the parameters slot

parameters<-

signature(object = "KineticLaw"): sets the parameters slot

Author(s)

Michael Lawrence

References

http://sbml.org/documents/

rsbml documentation built on Nov. 8, 2020, 8:09 p.m.