SBase-class: SBML type "SBase"

In rsbml: R support for SBML, using libsbml

Description

The abstract type from which all other SBML types are derived.

Instantiation

A virtual Class: No objects may be created from it.

Slots

metaId:

Object of class "character" that is an XML ID "described" by an RDF resource. This links an SBML element to an RDF resource. RDF may appear anywhere in an SBML element, but is usually placed inside the annotation element.

notes:

Object of class "character" containing user-readable XHTML notes about an element.

annotation:

Object of class "character" containing additional machine-readable information about an element, usually as RDF, such as BioPAX. This is where application-specific data belongs.

cvTerms:

Object of class "list" containing instances of CVTerm associated with this element.

sboTerm:

Object of class "integer" identifying a term in the Systems Biology Ontology (SBO).

Methods

annotation

signature(object = "SBase"): gets the annotation slot

annotation<-

signature(object = "SBase"): sets the annotation slot

metaId

signature(object = "SBase"): gets the metaId slot

metaId<-

signature(object = "SBase"): sets the metaId slot

notes

signature(object = "SBase"): gets the notes slot

notes<-

signature(object = "SBase"): sets the notesslot

cvTerms

signature(object = "SBase"): gets the cvTerms slot.

cvTerms<-

signature(object = "SBase"): sets the cvTerms slot.

sboTerm

signature(object = "SBase"): gets the sboTerm slot.

sboTerm<-

signature(object = "SBase"): sets the sboTerm slot.

Author(s)

Michael Lawrence

References

http://sbml.org/documents/

rsbml documentation built on Nov. 8, 2020, 8:09 p.m.