Description Instantiation Slots Extends Methods Author(s) References
A glyph representing a Reaction
in the SBML layout.
Objects can be created by calls of the form new("ReactionGlyph", ...)
.
reaction
:Object of class "character"
identifying the reaction
represented by this glyph.
glyphCurve
:Object of class "Curve"
describing
this glyph as a curve (optional).
speciesReferenceGlyphs
:Object of class "list"
containing
SpeciesReferenceGlyph
s that represent the
SpeciesReference
s of the
underlying Reaction
. The names of the list
correspond to the IDs of the elements.
id
:Object of class "character"
uniquely identifying this component.
boundingBox
:Object of class "BoundingBox"
describing
the position and size of the graphical object.
metaId
:Object of class "character"
that is an XML ID
"described" by an RDF resource. This links an SBML element to an RDF
resource. RDF may appear anywhere in an SBML element,
but is usually placed inside the annotation
element.
notes
:Object of class "character"
containing user-readable XHTML notes about an element.
annotation
:Object of class "character"
containing
additional machine-readable information about an element, usually as RDF,
such as BioPAX. This is where application-specific data belongs.
cvTerms
:Object of class "list"
containing
instances of CVTerm
associated with this
element.
sboTerm
:Object of class "integer"
identifying
a term in the Systems Biology Ontology (SBO).
Class "GraphicalObject"
, directly.
Class "SBase"
, by class "GraphicalObject", distance 2.
signature(expr = "ReactionGlyph")
: gets the
glyphCurve
slot
signature(object = "ReactionGlyph")
: sets the glyphCurve
slot
signature(object = "ReactionGlyph")
: gets the reaction
slot
signature(object = "ReactionGlyph")
: sets the reaction
slot
signature(object = "ReactionGlyph")
: gets the speciesReferenceGlyphs
slot
signature(object = "ReactionGlyph")
: sets the speciesReferenceGlyphs
slot
Michael Lawrence
http://projects.villa-bosch.de/bcb/sbml
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