scoredf_tcga_mes: Pre-computed scores of the TCGA breast cancer gene expression...

Description Usage Format References See Also


This data.frame stores pre-computed scores of the TCGA dataset calculated using the simpleScore() function against the mesenchymal gene signature from Tan, Tuan Zea et al. Please refer to the vignettes for instructions on how to obtain the full datasets.




An object of class data.frame with 1119 rows and 2 columns.


Tan, Tuan Zea, Qing Hao Miow, Yoshio Miki, Tetsuo Noda, Seiichi Mori, Ruby Yun-Ju Huang, and Jean Paul Thiery. 2014–10AD. “Epithelial-Mesenchymal Transition Spectrum Quantification and Its Efficacy in Deciphering Survival and Drug Responses of Cancer Patients.” EMBO Molecular Medicine 6 (10). Oxford, UK: BlackWell Publishing Ltd: 1279–93 doi:10.15252/emmm.201404208.

See Also


singscore documentation built on April 29, 2020, 5:18 a.m.