tgfb_gs_up: Gene set of up-regulated genes for the TGFb-induced EMT gene...
In singscore: Rank-based single-sample gene set scoring method
Description
Usage
Format
Source
References
See Also
Description
A GeneSet object that contains the up-regulated genes of the TGFb-induced EMT
gene signature that was derived by (Foroutan et al.,2017), using two
meta-analysis techniques. The gene signature contains an up-regulated gene
set (up-set) and a down-regulated gene set (down-set). Please refer to the
vignettes for the steps to acquire the exact data object.
Usage
1
Format
A GeneSet object
Source
References
Foroutan, Momeneh, Joseph Cursons, Soroor Hediyeh-Zadeh, Erik W
Thompson, and Melissa J Davis. 2017. “A Transcriptional Program for Detecting
Tgfbeta-Induced Emt in Cancer.” Molecular Cancer Research. American
Association for Cancer Research. doi:10.1158/1541-7786.MCR-16-0313.
See Also
"GeneSet",tgfb_gs_dn
singscore documentation built on Nov. 8, 2020, 8:27 p.m.
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Description Usage Format Source References See Also
Description
A GeneSet object that contains the up-regulated genes of the TGFb-induced EMT gene signature that was derived by (Foroutan et al.,2017), using two meta-analysis techniques. The gene signature contains an up-regulated gene set (up-set) and a down-regulated gene set (down-set). Please refer to the vignettes for the steps to acquire the exact data object.
Usage
1 |
Format
A GeneSet object
Source
References
Foroutan, Momeneh, Joseph Cursons, Soroor Hediyeh-Zadeh, Erik W Thompson, and Melissa J Davis. 2017. “A Transcriptional Program for Detecting Tgfbeta-Induced Emt in Cancer.” Molecular Cancer Research. American Association for Cancer Research. doi:10.1158/1541-7786.MCR-16-0313.
See Also
"GeneSet",tgfb_gs_dn
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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