toy_expr_se: A toy gene expression dataset of two samples
In singscore: Rank-based single-sample gene set scoring method
Description
Usage
Format
Source
References
Description
A toy dataset consisting of 2 samples with the expression values of 20 genes.
The data was created by sampling 2 samples and 20 genes from the dataset by
Foroutan et al, 2017.
Usage
1
Format
A SummarizedExperiment of 2 samples each with 20 genes
- D_Ctrl_R1
a control sample
- D_TGFb_R1
a TGFb-treated sample
Source
References
Foroutan, Momeneh, Joseph Cursons, Soroor Hediyeh-Zadeh, Erik W
Thompson, and Melissa J Davis. 2017. “A Transcriptional Program for
Detecting Tgfbeta-Induced Emt in Cancer.” Molecular Cancer Research.
American Association for Cancer Research.
doi:10.1158/1541-7786.MCR-16-0313.
singscore documentation built on Nov. 8, 2020, 8:27 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Format Source References
Description
A toy dataset consisting of 2 samples with the expression values of 20 genes. The data was created by sampling 2 samples and 20 genes from the dataset by Foroutan et al, 2017.
Usage
1 |
Format
A SummarizedExperiment of 2 samples each with 20 genes
- D_Ctrl_R1
a control sample
- D_TGFb_R1
a TGFb-treated sample
Source
References
Foroutan, Momeneh, Joseph Cursons, Soroor Hediyeh-Zadeh, Erik W Thompson, and Melissa J Davis. 2017. “A Transcriptional Program for Detecting Tgfbeta-Induced Emt in Cancer.” Molecular Cancer Research. American Association for Cancer Research. doi:10.1158/1541-7786.MCR-16-0313.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.