toy_expr_se: A toy gene expression dataset of two samples

Description Usage Format Source References

Description

A toy dataset consisting of 2 samples with the expression values of 20 genes. The data was created by sampling 2 samples and 20 genes from the dataset by Foroutan et al, 2017.

Usage

1

Format

A SummarizedExperiment of 2 samples each with 20 genes

D_Ctrl_R1

a control sample

D_TGFb_R1

a TGFb-treated sample

Source

Foroutan et al.,2017

References

Foroutan, Momeneh, Joseph Cursons, Soroor Hediyeh-Zadeh, Erik W Thompson, and Melissa J Davis. 2017. “A Transcriptional Program for Detecting Tgfbeta-Induced Emt in Cancer.” Molecular Cancer Research. American Association for Cancer Research. doi:10.1158/1541-7786.MCR-16-0313.


singscore documentation built on Nov. 8, 2020, 8:27 p.m.