Files in sva
Surrogate Variable Analysis

NAMESPACE
DESCRIPTION
inst/extdata/region_matrix_all/gtex_5sample_region_matrix.txt
inst/extdata/region_matrix_one/SRR604050.cov
inst/extdata/region_matrix_one/SRR608456.cov
inst/extdata/region_matrix_one/SRR595926.cov
inst/extdata/region_matrix_one/SRR607214.cov
inst/extdata/region_matrix_one/SRR604098.cov
inst/extdata/bwtool/SRR608456_degradeStats_polyA.txt
inst/extdata/bwtool/SRR607214_degradeStats_polyA.txt
inst/extdata/bwtool/SRR595926_degradeStats_polyA.txt
inst/extdata/bwtool/SRR604050_degradeStats_polyA.txt
inst/extdata/bwtool/SRR604098_degradeStats_polyA.txt
inst/doc/sva.R
inst/doc/sva.Rnw
inst/doc/sva.pdf
src/sva.c
R/f.pvalue.R R/psva.R R/num.sv.R R/svaseq.R R/twostepsva.build.R R/sva-package.R R/empirical.controls.R R/qsva.R R/irwsva.build.R R/read.degradation.matrix.R R/fsva.R R/fstats.R R/ssva.R R/ComBat.R R/sva.check.R R/helper.R R/sva.R
build/vignette.rds
tests/testthat.R tests/testthat/test_combat_bladderbatch.R tests/testthat/test_combat_sim.R tests/testthat/test_combat_bladderbatch_parallel.R tests/testthat/test_combat_errors.R man/psva.Rd man/svaseq.Rd man/qsva.Rd man/f.pvalue.Rd man/twostepsva.build.Rd man/sva.check.Rd man/read.degradation.matrix.Rd man/fsva.Rd man/ssva.Rd man/empirical.controls.Rd man/fstats.Rd man/num.sv.Rd man/ComBat.Rd man/irwsva.build.Rd man/sva.Rd
vignettes/sva.bib
vignettes/sva.Rnw
sva documentation built on Nov. 17, 2017, 8:49 a.m.