target: Predict Combined Function of Transcription Factors

Implement the BETA algorithm for infering direct target genes from DNA-binding and perturbation expression data Wang et al. (2013) <doi: 10.1038/nprot.2013.150>. Extend the algorithm to predict the combined function of two DNA-binding elements from comprable binding and expression data.

Package details

AuthorMahmoud Ahmed [aut, cre]
Bioconductor views Software StatisticalMethod Transcription
MaintainerMahmoud Ahmed <[email protected]>
LicenseGPL-3
Version1.0.0
URL https://github.com/MahShaaban/target
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("target")

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target documentation built on Oct. 31, 2019, 6:53 a.m.