target: Predict Combined Function of Transcription Factors

Implement the BETA algorithm for infering direct target genes from DNA-binding and perturbation expression data Wang et al. (2013) <doi: 10.1038/nprot.2013.150>. Extend the algorithm to predict the combined function of two DNA-binding elements from comprable binding and expression data.

Package details

AuthorMahmoud Ahmed [aut, cre]
Bioconductor views Software StatisticalMethod Transcription
MaintainerMahmoud Ahmed <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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target documentation built on Nov. 8, 2020, 5:28 p.m.