rank_product: Calculate the regions rank products

In target: Predict Combined Function of Transcription Factors

Description

Calculate the rank products of the rank of the distances and the statistics.

Usage

rank_product(region_score, region_stat, region_id)

Arguments

region_score	A vector of numerics
region_stat	A vector of numerics
region_id	A vector of characters

Value

A vector of numerics

Examples

library(IRanges)

query <- IRanges(c(1, 4, 9), c(5, 7, 10))
subject <- IRanges(c(2, 2, 10), c(2, 3, 12))
distance <- find_distance(query, subject)
peak_score <- score_peaks(distance, 100000)
region_id <- c('region1', 'region1', 'region2')
region_score <- score_regions(peak_score, region_id)
region_stat <- c(30, 30, -40)
rank_product(region_score, region_stat, region_id)

target documentation built on Nov. 8, 2020, 5:28 p.m.