fill_NA_using_formula: This function is needed for DE in case the matrix is not...

In tidybulk: Brings transcriptomics to the tidyverse

Description

This function is needed for DE in case the matrix is not rectangular, but includes NA

Usage

fill_NA_using_formula(
  .data,
  .formula,
  .sample = NULL,
  .transcript = NULL,
  .abundance = NULL,
  .abundance_scaled = NULL
)

Arguments

.data	A tibble
.formula	a formula with no response variable, of the kind ~ factor_of_intrest + batch
.sample	The name of the sample column
.transcript	The name of the transcript/gene column
.abundance	The name of the transcript/gene abundance column
.abundance_scaled	The name of the transcript/gene scaled abundance column

Value

A tibble with adjusted counts

tidybulk documentation built on April 7, 2021, 6 p.m.