Description Usage Arguments Value References Examples
View source: R/gene_comb_plot.R
Gene/gene ratios of two gene families can be plotted as an gene_comb_plot().
1 | gene_comb_plot(data, text, legend_position, a, b)
|
data |
Results from the function gene_comb_funk(). |
text |
The legend of the plot. |
legend_position |
The position of the legend. It can be "none","left", "right", "bottom", "top". |
a |
The angle of X-axis legend. |
b |
The distance from X-axis to legend. |
Output is the plot of gene/gene ratios of two gene families.
Bischof J. and Ibrahim SM. bcRep: R Package for Comprehensive Analysis of B Cell Receptor Repertoire Data. PLoS One. 11(8):e0161569, 2016. doi: 10.1371/journal.pone.0161569.
1 2 3 4 | data(IMGTtab1)
gane_comb<-gene_comb_funk(family1 = IMGTtab1$V_GENE_and_allele,
family2 = IMGTtab1$J_GENE_and_allele)
gene_comb_plot(gane_comb, "Plot of IGHV and IGHJ ratio", legend_position = "right", a = 35, b = 0.5)
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.