lengthCDR3: Frequency distribution of the CDR3 length
In BCellMA: B Cell Receptor Somatic Hyper Mutation Analysis
Description
Usage
Arguments
Value
References
Examples
Description
Calculate length of CDR3.
Usage
1
Arguments
data
"CDR3_IMGT_length" colums from IMGT/HighV-Quest table 1 coled "1_Summary.txt"
Value
Output Output is the number of amino acids in CDR3.
References
references Bischof J. and Ibrahim SM. bcRep: R Package for Comprehensive Analysis of B Cell Receptor Repertoire Data. PLoS One. 11(8):e0161569, 2016. doi: 10.1371/journal.pone.0161569.
Examples
1
2
data(IMGTtab1)
lenght_tab<-lengthCDR3(as.numeric(IMGTtab1$CDR3_IMGT_length))
BCellMA documentation built on May 1, 2019, 7:58 p.m.
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Description Usage Arguments Value References Examples
Description
Calculate length of CDR3.
Usage
1 |
Arguments
data |
"CDR3_IMGT_length" colums from IMGT/HighV-Quest table 1 coled "1_Summary.txt" |
Value
Output Output is the number of amino acids in CDR3.
References
references Bischof J. and Ibrahim SM. bcRep: R Package for Comprehensive Analysis of B Cell Receptor Repertoire Data. PLoS One. 11(8):e0161569, 2016. doi: 10.1371/journal.pone.0161569.
Examples
1 2 | data(IMGTtab1)
lenght_tab<-lengthCDR3(as.numeric(IMGTtab1$CDR3_IMGT_length))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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