Boom: Bayesian Object Oriented Modeling

A C++ library for Bayesian modeling, with an emphasis on Markov chain Monte Carlo. Although boom contains a few R utilities (mainly plotting functions), its primary purpose is to install the BOOM C++ library on your system so that other packages can link against it.

AuthorSteven L. Scott is the sole author and creator of the BOOM project. Some code in the BOOM libraries has been modified from other open source projects. These include Cephes (obtained from Netlib, written by Stephen L. Moshier), NEWUOA (M.J.D Powell, obtained from Powell's web site), and a modified version of the R math libraries (R core development team). Original copyright notices have been maintained in all source files. In these cases, copyright claimed by Steven L. Scott is limited to modifications made to the original code.
Date of publication2016-08-18 09:48:03
MaintainerSteve Scott <stevescott@google.com>
LicenseLGPL-2.1 | file LICENSE
Version0.5

View on CRAN

Man pages

add.segments: Function to add horizontal line segments to an existing plot

ar1.coefficient.prior: Normal prior for an AR1 coefficient

beta.prior: Beta prior for a binomial proportion

boxplot.mcmc.matrix: Plot the distribution of a matrix

boxplot.true: side-by-side boxplots from a matrix, with optional reference...

check.data: Checking data formats

compare.den: Compare several density estimates.

compare.many.densities: Compare several density estimates.

compare.many.ts: Compares several density estimates.

compare.vector.distributions: Boxplots to compare distributions of vectors

dirichlet.prior: Dirichlet prior for a multinomial distribution

discrete-uniform-prior: Discrete prior distributions

double.model: Prior distributions for a real valued scalar

external.legend: Add an external legend to an array of plots.

gamma.prior: Gamma prior distribution

generate_factor_data: Generate a data frame of all factor data

histabunch: A Bunch of Histograms

is.even: Check whether a number is even or odd.

lognormal.prior: Lognormal Prior Distribution

markov.prior: Prior for a Markov chain

match_data_frame: MatchDataFrame

mvn.diagonal.prior: diagonal MVN prior

mvn.independent.sigma.prior: Independence prior for the MVN

mvn.prior: Multivariate normal prior

normal.inverse.gamma.prior: Normal inverse gamma prior

normal.inverse.wishart.prior: Normal inverse Wishart prior

normal.prior: Normal (scalar Gaussian) prior distribution

pairs.density: Pairs plot for posterior distributions.

plot.density.contours: Contour plot of a bivariate density.

plot.dynamic.distribution: Plots the pointwise evolution of a distribution over an index...

plot.macf: Plots individual autocorrelation functions for many-valued...

plot.many.ts: Multiple time series plots

sd.prior: Prior for a standard deviation or variance

suggest.burn.log.likelihood: Suggest MCMC Burn-in from Log Likelihood

thin: Thin the rows of a matrix

uniform.prior: Uniform prior distribution

Functions

AddExternalLegend Man page
add.segments Man page
AddSegments Man page
Ar1CoefficientPrior Man page
BetaPrior Man page
boxplot.mcmc.matrix Man page
BoxplotMcmcMatrix Man page
boxplot.true Man page
BoxplotTrue Man page
check.data Man page
check.nonnegative.scalar Man page
check.positive.scalar Man page
check.probability.distribution Man page
check.scalar.integer Man page
check.scalar.probability Man page
compare.den Man page
CompareDen Man page
compare.densities Man page
CompareDensities Man page
compare.many.densities Man page
CompareManyDensities Man page
compare.many.ts Man page
CompareManyTs Man page
compare.vector.boxplots Man page
CompareVectorBoxplots Man page
DirichletPrior Man page
DiscreteUniformPrior Man page
double.model Man page
DoubleModel Man page
ExternalLegendLayout Man page
GammaPrior Man page
GenerateFactorData Man page
histabunch Man page
is.even Man page
IsEven Man page
is.odd Man page
IsOdd Man page
LognormalPrior Man page
MarkovPrior Man page
MatchDataFrame Man page
MvnDiagonalPrior Man page
MvnIndependentSigmaPrior Man page
MvnPrior Man page
NormalInverseGammaPrior Man page
NormalInverseWishartPrior Man page
NormalPrior Man page
PairsDensity Man page
PlotDensityContours Man page
PlotDynamicDistribution Man page
plot.macf Man page
PlotMacf Man page
plot.many.ts Man page
PlotManyTs Man page
PointMassPrior Man page
PoissonPrior Man page
SdPrior Man page
SuggestBurnLogLikelihood Man page
thin Man page
UniformPrior Man page

Files

Boom
Boom/inst
Boom/inst/include
Boom/inst/include/Samplers
Boom/inst/include/Samplers/UnivariateSliceSampler.hpp
Boom/inst/include/Samplers/ScalarLangevinSampler.hpp
Boom/inst/include/Samplers/ImportanceResampler.hpp
Boom/inst/include/Samplers/Sampler.hpp
Boom/inst/include/Samplers/UnivariateLangevinSampler.hpp
Boom/inst/include/Samplers/MoveAccounting.hpp
Boom/inst/include/Samplers/RejectionSampler.hpp
Boom/inst/include/Samplers/ScalarSliceSampler.hpp
Boom/inst/include/Samplers/ARMS.hpp
Boom/inst/include/Samplers/DirectProposal.hpp
Boom/inst/include/Samplers/SliceSampler.hpp
Boom/inst/include/Samplers/MetropolisHastings.hpp
Boom/inst/include/Samplers/TIM.hpp
Boom/inst/include/Samplers/MH_Proposals.hpp
Boom/inst/include/Samplers/ScalarAdaptiveRejectionSampler.hpp
Boom/inst/include/Samplers/Gilks
Boom/inst/include/Samplers/Gilks/arms.hpp
Boom/inst/include/distributions
Boom/inst/include/distributions/inverse_gaussian.hpp
Boom/inst/include/distributions/DoublyBoundedAdaptiveRejectionSampler.hpp
Boom/inst/include/distributions/trun_logit.hpp
Boom/inst/include/distributions/rng.hpp
Boom/inst/include/distributions/BinomialDistribution.hpp
Boom/inst/include/distributions/BoundedAdaptiveRejectionSampler.hpp
Boom/inst/include/distributions/Rmath_dist.hpp
Boom/inst/include/distributions/trun_gamma.hpp
Boom/inst/include/distributions/Markov.hpp
Boom/inst/include/distributions/ks.hpp
Boom/inst/include/LinAlg
Boom/inst/include/LinAlg/QR.hpp
Boom/inst/include/LinAlg/Kronecker.hpp
Boom/inst/include/LinAlg/Givens.hpp
Boom/inst/include/LinAlg/Array3.hpp
Boom/inst/include/LinAlg/SWEEP.hpp
Boom/inst/include/LinAlg/VectorView.hpp
Boom/inst/include/LinAlg/Selector.hpp
Boom/inst/include/LinAlg/DiagonalMatrix.hpp
Boom/inst/include/LinAlg/CorrelationMatrix.hpp
Boom/inst/include/LinAlg/LU.hpp
Boom/inst/include/LinAlg/LinAlgExceptions.hpp
Boom/inst/include/LinAlg/MatrixPartition.hpp
Boom/inst/include/LinAlg/ArrayIterator.hpp
Boom/inst/include/LinAlg/Array.hpp
Boom/inst/include/LinAlg/VectorViewIterator.hpp
Boom/inst/include/LinAlg/Vector.hpp
Boom/inst/include/LinAlg/SVD.hpp
Boom/inst/include/LinAlg/SpdMatrix.hpp
Boom/inst/include/LinAlg/Eigen.hpp
Boom/inst/include/LinAlg/blas.hpp
Boom/inst/include/LinAlg/Cholesky.hpp
Boom/inst/include/LinAlg/Matrix.hpp
Boom/inst/include/LinAlg/stack_columns.hpp
Boom/inst/include/LinAlg/SubMatrix.hpp
Boom/inst/include/cpputil
Boom/inst/include/cpputil/ordering.hpp
Boom/inst/include/cpputil/ParamHolder.hpp
Boom/inst/include/cpputil/random_element.hpp
Boom/inst/include/cpputil/ask_to_continue.hpp
Boom/inst/include/cpputil/make_unique_preserve_order.hpp
Boom/inst/include/cpputil/str2d.hpp
Boom/inst/include/cpputil/date_utils.hpp
Boom/inst/include/cpputil/index_table.hpp
Boom/inst/include/cpputil/stream.hpp
Boom/inst/include/cpputil/ProgramOptions.hpp
Boom/inst/include/cpputil/level_iterator.hpp
Boom/inst/include/cpputil/permute.hpp
Boom/inst/include/cpputil/ParamFileIoManager.hpp
Boom/inst/include/cpputil/Ptr.hpp
Boom/inst/include/cpputil/OutputTable.hpp
Boom/inst/include/cpputil/Redirector.hpp
Boom/inst/include/cpputil/file_utils.hpp
Boom/inst/include/cpputil/lse.hpp
Boom/inst/include/cpputil/DateTime.hpp
Boom/inst/include/cpputil/math_utils.hpp
Boom/inst/include/cpputil/nyi.hpp
Boom/inst/include/cpputil/Date.hpp
Boom/inst/include/cpputil/compare_vector_bool.hpp
Boom/inst/include/cpputil/apply_permutation.hpp
Boom/inst/include/cpputil/scan.hpp
Boom/inst/include/cpputil/report_error.hpp
Boom/inst/include/cpputil/string_utils.hpp
Boom/inst/include/cpputil/seq.hpp
Boom/inst/include/cpputil/rep.hpp
Boom/inst/include/cpputil/DefaultVnames.hpp
Boom/inst/include/cpputil/print.hpp
Boom/inst/include/cpputil/Constants.hpp
Boom/inst/include/cpputil/ProgressTracker.hpp
Boom/inst/include/cpputil/unmap.hpp
Boom/inst/include/cpputil/portable_math.hpp
Boom/inst/include/cpputil/Split.hpp
Boom/inst/include/cpputil/parse_range.hpp
Boom/inst/include/cpputil/ThrowException.hpp
Boom/inst/include/cpputil/RefCounted.hpp
Boom/inst/include/cpputil/Polynomial.hpp
Boom/inst/include/cpputil/gll.hpp
Boom/inst/include/cpputil/LongString.hpp
Boom/inst/include/distributions.hpp
Boom/inst/include/TargetFun
Boom/inst/include/TargetFun/ScalarLogpostTF.hpp
Boom/inst/include/TargetFun/TargetFun.hpp
Boom/inst/include/TargetFun/LogPost.hpp
Boom/inst/include/TargetFun/JacobianChecker.hpp
Boom/inst/include/TargetFun/Loglike.hpp
Boom/inst/include/TargetFun/Transformation.hpp
Boom/inst/include/stats
Boom/inst/include/stats/Design.hpp
Boom/inst/include/stats/NaturalSpline.hpp
Boom/inst/include/stats/IQagent.hpp
Boom/inst/include/stats/ols.hpp
Boom/inst/include/stats/moments.hpp
Boom/inst/include/stats/logit.hpp
Boom/inst/include/stats/compare_binomial_proportions.hpp
Boom/inst/include/stats/diff.hpp
Boom/inst/include/stats/Resampler.hpp
Boom/inst/include/stats/regression.hpp
Boom/inst/include/stats/DataTable.hpp
Boom/inst/include/stats/Spline.hpp
Boom/inst/include/stats/ChiSquareTest.hpp
Boom/inst/include/stats/Bspline.hpp
Boom/inst/include/stats/ECDF.hpp
Boom/inst/include/stats/FreqDist.hpp
Boom/inst/include/stats/simple_random_sample.hpp
Boom/inst/include/stats/compare_predictions.hpp
Boom/inst/include/Models
Boom/inst/include/Models/BernoulliModel.hpp
Boom/inst/include/Models/WeightedData.hpp
Boom/inst/include/Models/ZeroInflatedPoissonModel.hpp
Boom/inst/include/Models/DoubleModel.hpp
Boom/inst/include/Models/Glm
Boom/inst/include/Models/Glm/Glm.hpp
Boom/inst/include/Models/Glm/MultinomialProbitModel.hpp
Boom/inst/include/Models/Glm/MvnGivenX.hpp
Boom/inst/include/Models/Glm/WeightedRegressionModel.hpp
Boom/inst/include/Models/Glm/MultinomialLogitModel.hpp
Boom/inst/include/Models/Glm/ZeroInflatedGammaRegression.hpp
Boom/inst/include/Models/Glm/ChoiceData.hpp
Boom/inst/include/Models/Glm/PoissonRegressionData.hpp
Boom/inst/include/Models/Glm/ZeroInflatedPoissonRegression.hpp
Boom/inst/include/Models/Glm/ZeroInflatedLognormalRegression.hpp
Boom/inst/include/Models/Glm/HierarchicalPoissonRegression.hpp
Boom/inst/include/Models/Glm/LogisticRegressionModel.hpp
Boom/inst/include/Models/Glm/MvnGivenXandSigma.hpp
Boom/inst/include/Models/Glm/TRegression.hpp
Boom/inst/include/Models/Glm/BinomialProbitModel.hpp
Boom/inst/include/Models/Glm/RegressionModel.hpp
Boom/inst/include/Models/Glm/MvtRegModel.hpp
Boom/inst/include/Models/Glm/PoissonRegressionModel.hpp
Boom/inst/include/Models/Glm/GlmCoefs.hpp
Boom/inst/include/Models/Glm/MvReg2.hpp
Boom/inst/include/Models/Glm/ProbitRegression.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers
Boom/inst/include/Models/Glm/PosteriorSamplers/TDataImputer.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/PoissonRegressionRwmSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/draw_logit_lambda.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/DAFE_MLM.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/ZeroInflatedLognormalRegressionPosteriorSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/BinomialProbitDataImputer.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/MnpBetaGivenSigmaSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/MlogitRwm.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/MvtRegSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/MultinomialLogitCompleteDataSuf.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/PoissonDataImputer.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/ZeroInflatedGammaRegressionPosteriorSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/BinomialLogitSamplerTim.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/PoissonRegressionAuxMixSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/TRegressionSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/BregVsSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/AggregatedRegressionSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/MLVS.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/BinomialProbitSpikeSlabSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/ProbitSpikeSlabSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/TRegressionSpikeSlabSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/BinomialLogitSpikeSlabSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/BinomialLogitSamplerRwm.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/MultinomialLogitCompositeSpikeSlabSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/SpikeSlabSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/BinomialLogitDataImputer.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/HierarchicalPoissonRegressionSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/ZeroInflatedPoissonRegressionSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/ProbitRegressionSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/SpikeSlabDaRegressionSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/PoissonRegressionSpikeSlabSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/MLVS_data_imputer.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/NormalMixtureApproximation.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/CumulativeProbitSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/MnpBetaSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/RegressionConjSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/BinomialLogitAuxmixSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/LogitSamplerBma.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/PartRegSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/BinomialProbitTimSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/LogitSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/poisson_mixture_approximation_table.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/MLAuxMixSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/CumulativeLogitSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/VsPriorSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/MvRegSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/BinomialProbitCompositeSpikeSlabSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/BinomialLogitCompositeSpikeSlabSampler.hpp
Boom/inst/include/Models/Glm/PosteriorSamplers/GammaRegressionPosteriorSampler.hpp
Boom/inst/include/Models/Glm/BinomialLogitModel.hpp
Boom/inst/include/Models/Glm/GammaRegressionModel.hpp
Boom/inst/include/Models/Glm/BinomialRegressionData.hpp
Boom/inst/include/Models/Glm/AggregatedRegressionModel.hpp
Boom/inst/include/Models/Glm/OrdinalCutpointModel.hpp
Boom/inst/include/Models/Glm/VariableSelectionPrior.hpp
Boom/inst/include/Models/Glm/CumulativeProbitModel.hpp
Boom/inst/include/Models/Glm/ModelSelectionConcepts.hpp
Boom/inst/include/Models/Glm/GlmMvnPriorBase.hpp
Boom/inst/include/Models/Glm/CumulativeLogitModel.hpp
Boom/inst/include/Models/MvnGivenSigma.hpp
Boom/inst/include/Models/ZeroMeanMvnModel.hpp
Boom/inst/include/Models/WishartModel.hpp
Boom/inst/include/Models/ExponentialModel.hpp
Boom/inst/include/Models/BinomialModel.hpp
Boom/inst/include/Models/MvnModel.hpp
Boom/inst/include/Models/ConstrainedVectorParams.hpp
Boom/inst/include/Models/MvtModel.hpp
Boom/inst/include/Models/MultinomialModel.hpp
Boom/inst/include/Models/IndependentMvnModelGivenScalarSigma.hpp
Boom/inst/include/Models/FiniteMixtureModel.hpp
Boom/inst/include/Models/ProductDirichletModel.hpp
Boom/inst/include/Models/SpdParams.hpp
Boom/inst/include/Models/Nonparametric
Boom/inst/include/Models/Nonparametric/BayesRules.hpp
Boom/inst/include/Models/Nonparametric/BayesRulesModel.hpp
Boom/inst/include/Models/Nonparametric/DataTableDataPolicy.hpp
Boom/inst/include/Models/Nonparametric/GaussianBayesRulesModel.hpp
Boom/inst/include/Models/Nonparametric/PosteriorSamplers
Boom/inst/include/Models/Nonparametric/PosteriorSamplers/ProposalDistributions.hpp
Boom/inst/include/Models/Nonparametric/PosteriorSamplers/GaussianBayesRulesPosteriorSampler.hpp
Boom/inst/include/Models/Nonparametric/PosteriorSamplers/BagOfRulesPrior.hpp
Boom/inst/include/Models/Nonparametric/PosteriorSamplers/BayesRulesPosteriorSampler.hpp
Boom/inst/include/Models/Mixtures
Boom/inst/include/Models/Mixtures/DirichletProcessMvnModel.hpp
Boom/inst/include/Models/Mixtures/ConditionalFiniteMixtureModel.hpp
Boom/inst/include/Models/Mixtures/PosteriorSamplers
Boom/inst/include/Models/Mixtures/PosteriorSamplers/DirichletProcessMvnCollapsedGibbsSampler.hpp
Boom/inst/include/Models/Mixtures/PosteriorSamplers/ConditionalFiniteMixtureSampler.hpp
Boom/inst/include/Models/Policies
Boom/inst/include/Models/Policies/IID_DataPolicy.hpp
Boom/inst/include/Models/Policies/ParamPolicy_2.hpp
Boom/inst/include/Models/Policies/PriorPolicy.hpp
Boom/inst/include/Models/Policies/ManyParamPolicy.hpp
Boom/inst/include/Models/Policies/DataInfoPolicy.hpp
Boom/inst/include/Models/Policies/CompositeParamPolicy.hpp
Boom/inst/include/Models/Policies/NullParamPolicy.hpp
Boom/inst/include/Models/Policies/ParamPolicy_1.hpp
Boom/inst/include/Models/Policies/NullDataPolicy.hpp
Boom/inst/include/Models/Policies/SufstatOnlyDataPolicy.hpp
Boom/inst/include/Models/Policies/ParamPolicy_4.hpp
Boom/inst/include/Models/Policies/SufstatDataPolicy.hpp
Boom/inst/include/Models/Policies/NonparametricParamPolicy.hpp
Boom/inst/include/Models/Policies/MixtureDataPolicy.hpp
Boom/inst/include/Models/Policies/ParamPolicy_3.hpp
Boom/inst/include/Models/PoissonModel.hpp
Boom/inst/include/Models/ParamTypes.hpp
Boom/inst/include/Models/CompositeModel.hpp
Boom/inst/include/Models/DataPair.hpp
Boom/inst/include/Models/LognormalModel.hpp
Boom/inst/include/Models/GaussianModelGivenSigma.hpp
Boom/inst/include/Models/HMM
Boom/inst/include/Models/HMM/hmm_tools.hpp
Boom/inst/include/Models/HMM/HmmFilter.hpp
Boom/inst/include/Models/HMM/Clickstream
Boom/inst/include/Models/HMM/Clickstream/NestedHmm.hpp
Boom/inst/include/Models/HMM/Clickstream/Session.hpp
Boom/inst/include/Models/HMM/Clickstream/PosteriorSamplers
Boom/inst/include/Models/HMM/Clickstream/PosteriorSamplers/NestedHmmPosteriorSampler.hpp
Boom/inst/include/Models/HMM/Clickstream/Stream.hpp
Boom/inst/include/Models/HMM/Clickstream/Event.hpp
Boom/inst/include/Models/HMM/HmmDataImputer.hpp
Boom/inst/include/Models/HMM/PosteriorSamplers
Boom/inst/include/Models/HMM/PosteriorSamplers/HmmPosteriorSampler.hpp
Boom/inst/include/Models/HMM/HealthStateModel.hpp
Boom/inst/include/Models/HMM/HMM2.hpp
Boom/inst/include/Models/MarginallyUniformCorrelationModel.hpp
Boom/inst/include/Models/MvnGivenScalarSigma.hpp
Boom/inst/include/Models/SpdModel.hpp
Boom/inst/include/Models/SufstatAbstractCombineImpl.hpp
Boom/inst/include/Models/MvnBase.hpp
Boom/inst/include/Models/ProductModel.hpp
Boom/inst/include/Models/UniformShrinkagePriorModel.hpp
Boom/inst/include/Models/DataTypes.hpp
Boom/inst/include/Models/SpdData.hpp
Boom/inst/include/Models/GaussianModelBase.hpp
Boom/inst/include/Models/ZeroInflatedLognormalModel.hpp
Boom/inst/include/Models/CompositeVectorModel.hpp
Boom/inst/include/Models/UniformCorrelationModel.hpp
Boom/inst/include/Models/Bart
Boom/inst/include/Models/Bart/GaussianBartModel.hpp
Boom/inst/include/Models/Bart/Bart.hpp
Boom/inst/include/Models/Bart/ResidualRegressionData.hpp
Boom/inst/include/Models/Bart/LogitBartModel.hpp
Boom/inst/include/Models/Bart/PosteriorSamplers
Boom/inst/include/Models/Bart/PosteriorSamplers/BartPosteriorSampler.hpp
Boom/inst/include/Models/Bart/PosteriorSamplers/GaussianBartPosteriorSampler.hpp
Boom/inst/include/Models/Bart/PosteriorSamplers/ProbitBartPosteriorSampler.hpp
Boom/inst/include/Models/Bart/PosteriorSamplers/GaussianLinearBartPosteriorSampler.hpp
Boom/inst/include/Models/Bart/PosteriorSamplers/PoissonBartPosteriorSampler.hpp
Boom/inst/include/Models/Bart/PosteriorSamplers/LogitBartPosteriorSampler.hpp
Boom/inst/include/Models/Bart/ProbitBartModel.hpp
Boom/inst/include/Models/Bart/GaussianLinearBartModel.hpp
Boom/inst/include/Models/Bart/PoissonBartModel.hpp
Boom/inst/include/Models/PosteriorSamplers
Boom/inst/include/Models/PosteriorSamplers/ExchangeableDirichletSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/FixedSpdSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/MultinomialDirichletSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/PoissonGammaSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/MvnVarSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/PosteriorSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/ProductDirichletPosteriorSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/FixedProbBinomialSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/PoissonGammaPosteriorSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/SepStratSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/MvnMeanSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/ZeroMeanGaussianConjSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/BetaBinomialPosteriorSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/IndependentMvnVarSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/ExponentialGammaSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/ZeroInflatedGammaPosteriorSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/MarkovConjSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/GaussianConjSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/ZeroInflatedPoissonSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/FiniteMixturePosteriorSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/BetaBinomialSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/CompositeModelSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/ZeroMeanMvnIndependenceSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/SharedSigsqSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/CorrelationSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/FixedUnivariateSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/DirichletPosteriorSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/GaussianVarSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/CompositeSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/GaussianMeanSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/GammaPosteriorSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/MarkovConjShrinkageSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/ZeroInflatedLognormalPosteriorSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/IndependentMvnConjSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/Imputer.hpp
Boom/inst/include/Models/PosteriorSamplers/MvnConjSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/MvnIndependentVarianceSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/ZeroMeanMvnConjSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/BetaPosteriorSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/AbsorbingMarkovConjSampler.hpp
Boom/inst/include/Models/PosteriorSamplers/GenericGaussianVarianceSampler.hpp
Boom/inst/include/Models/StateSpace
Boom/inst/include/Models/StateSpace/StateSpacePoissonModel.hpp
Boom/inst/include/Models/StateSpace/StateSpaceModelBase.hpp
Boom/inst/include/Models/StateSpace/StateSpaceNormalMixture.hpp
Boom/inst/include/Models/StateSpace/AggregatedStateSpaceRegression.hpp
Boom/inst/include/Models/StateSpace/StateSpaceStudentRegressionModel.hpp
Boom/inst/include/Models/StateSpace/StateSpaceRegressionModel.hpp
Boom/inst/include/Models/StateSpace/PosteriorSamplers
Boom/inst/include/Models/StateSpace/PosteriorSamplers/StudentLocalLinearTrendPosteriorSampler.hpp
Boom/inst/include/Models/StateSpace/PosteriorSamplers/SufstatManager.hpp
Boom/inst/include/Models/StateSpace/PosteriorSamplers/AggregatedStateSpacePosteriorSampler.hpp
Boom/inst/include/Models/StateSpace/PosteriorSamplers/StateSpacePoissonPosteriorSampler.hpp
Boom/inst/include/Models/StateSpace/PosteriorSamplers/StateSpaceRegressionSampler.hpp
Boom/inst/include/Models/StateSpace/PosteriorSamplers/DynamicRegressionPosteriorSampler.hpp
Boom/inst/include/Models/StateSpace/PosteriorSamplers/StateSpacePosteriorSampler.hpp
Boom/inst/include/Models/StateSpace/PosteriorSamplers/StateSpaceStudentPosteriorSampler.hpp
Boom/inst/include/Models/StateSpace/PosteriorSamplers/StateSpaceLogitPosteriorSampler.hpp
Boom/inst/include/Models/StateSpace/StateSpaceLogitModel.hpp
Boom/inst/include/Models/StateSpace/StateSpaceModel.hpp
Boom/inst/include/Models/StateSpace/Filters
Boom/inst/include/Models/StateSpace/Filters/SparseVector.hpp
Boom/inst/include/Models/StateSpace/Filters/SparseMatrix.hpp
Boom/inst/include/Models/StateSpace/Filters/ScalarKalmanStorage.hpp
Boom/inst/include/Models/StateSpace/Filters/SparseKalmanTools.hpp
Boom/inst/include/Models/StateSpace/Filters/KalmanTools.hpp
Boom/inst/include/Models/StateSpace/StateModels
Boom/inst/include/Models/StateSpace/StateModels/Holiday.hpp
Boom/inst/include/Models/StateSpace/StateModels/RandomWalkHolidayStateModel.hpp
Boom/inst/include/Models/StateSpace/StateModels/StudentLocalLinearTrend.hpp
Boom/inst/include/Models/StateSpace/StateModels/ArStateModel.hpp
Boom/inst/include/Models/StateSpace/StateModels/DynamicRegressionStateModel.hpp
Boom/inst/include/Models/StateSpace/StateModels/RegressionStateModel.hpp
Boom/inst/include/Models/StateSpace/StateModels/TrigStateModel.hpp
Boom/inst/include/Models/StateSpace/StateModels/LocalLinearTrend.hpp
Boom/inst/include/Models/StateSpace/StateModels/SeasonalStateModel.hpp
Boom/inst/include/Models/StateSpace/StateModels/LocalLinearTrendMeanRevertingSlope.hpp
Boom/inst/include/Models/StateSpace/StateModels/StateModel.hpp
Boom/inst/include/Models/StateSpace/StateModels/LocalLevelStateModel.hpp
Boom/inst/include/Models/EmMixtureComponent.hpp
Boom/inst/include/Models/UniformModel.hpp
Boom/inst/include/Models/WeightedGaussianSuf.hpp
Boom/inst/include/Models/PointProcess
Boom/inst/include/Models/PointProcess/MarkovModulatedPoissonProcess.hpp
Boom/inst/include/Models/PointProcess/PoissonClusterProcess.hpp
Boom/inst/include/Models/PointProcess/PoissonProcess.hpp
Boom/inst/include/Models/PointProcess/HomogeneousPoissonProcess.hpp
Boom/inst/include/Models/PointProcess/BoundedPoissonProcessSimulator.hpp
Boom/inst/include/Models/PointProcess/PosteriorSamplers
Boom/inst/include/Models/PointProcess/PosteriorSamplers/WeeklyCyclePoissonProcessSampler.hpp
Boom/inst/include/Models/PointProcess/PosteriorSamplers/HomogeneousPoissonProcessPosteriorSampler.hpp
Boom/inst/include/Models/PointProcess/PosteriorSamplers/PoissonClusterPosteriorSampler.hpp
Boom/inst/include/Models/PointProcess/PosteriorSamplers/MarkovModulatedPoissonProcessPosteriorSampler.hpp
Boom/inst/include/Models/PointProcess/WeeklyCyclePoissonProcess.hpp
Boom/inst/include/Models/PointProcess/PointProcess.hpp
Boom/inst/include/Models/PointProcess/CosinePoissonProcess.hpp
Boom/inst/include/Models/ModelTypes.hpp
Boom/inst/include/Models/ZeroInflatedGammaModel.hpp
Boom/inst/include/Models/IndependentMvnModel.hpp
Boom/inst/include/Models/PoissonGammaModel.hpp
Boom/inst/include/Models/Sufstat.hpp
Boom/inst/include/Models/GaussianModel.hpp
Boom/inst/include/Models/BetaBinomialModel.hpp
Boom/inst/include/Models/TruncatedGammaModel.hpp
Boom/inst/include/Models/BetaModel.hpp
Boom/inst/include/Models/IRT
Boom/inst/include/Models/IRT/SubjectPrior.hpp
Boom/inst/include/Models/IRT/PcrNid.hpp
Boom/inst/include/Models/IRT/PartialCreditModel.hpp
Boom/inst/include/Models/IRT/SubjectSliceSampler.hpp
Boom/inst/include/Models/IRT/IRT.hpp
Boom/inst/include/Models/IRT/Subject.hpp
Boom/inst/include/Models/IRT/ItemDataPolicy.hpp
Boom/inst/include/Models/IRT/IrtModel.hpp
Boom/inst/include/Models/IRT/multisubscale_logit_cutpoint_model.hpp
Boom/inst/include/Models/IRT/Item.hpp
Boom/inst/include/Models/IRT/DafePcrRwm.hpp
Boom/inst/include/Models/IRT/DafePcr.hpp
Boom/inst/include/Models/IRT/ItemSliceSampler.hpp
Boom/inst/include/Models/IRT/Subject_prior.hpp
Boom/inst/include/Models/GammaModel.hpp
Boom/inst/include/Models/ChisqModel.hpp
Boom/inst/include/Models/WeightedMvnModel.hpp
Boom/inst/include/Models/ZeroMeanGaussianModel.hpp
Boom/inst/include/Models/Hierarchical
Boom/inst/include/Models/Hierarchical/HierarchicalZeroInflatedGammaModel.hpp
Boom/inst/include/Models/Hierarchical/HierarchicalDirichletModel.hpp
Boom/inst/include/Models/Hierarchical/HierarchicalPoissonModel.hpp
Boom/inst/include/Models/Hierarchical/HierarchicalZeroInflatedPoissonModel.hpp
Boom/inst/include/Models/Hierarchical/PosteriorSamplers
Boom/inst/include/Models/Hierarchical/PosteriorSamplers/HierarchicalGammaSampler.hpp
Boom/inst/include/Models/Hierarchical/PosteriorSamplers/HierarchicalDirichletPosteriorSampler.hpp
Boom/inst/include/Models/Hierarchical/PosteriorSamplers/HierarchicalZeroInflatedPoissonSampler.hpp
Boom/inst/include/Models/Hierarchical/PosteriorSamplers/HierarchicalZeroInflatedGammaSampler.hpp
Boom/inst/include/Models/Hierarchical/PosteriorSamplers/HierarchicalPoissonSampler.hpp
Boom/inst/include/Models/Hierarchical/HierarchicalGammaModel.hpp
Boom/inst/include/Models/Hierarchical/HierarchicalModel.hpp
Boom/inst/include/Models/CompositeData.hpp
Boom/inst/include/Models/ScaledChisqModel.hpp
Boom/inst/include/Models/DirichletModel.hpp
Boom/inst/include/Models/TimeSeries
Boom/inst/include/Models/TimeSeries/ArModel.hpp
Boom/inst/include/Models/TimeSeries/AugmentedTimeSeriesDataPolicy.hpp
Boom/inst/include/Models/TimeSeries/TimeSeriesSufstatDataPolicy.hpp
Boom/inst/include/Models/TimeSeries/TimeSeries.hpp
Boom/inst/include/Models/TimeSeries/TimeSeriesDataPolicy.hpp
Boom/inst/include/Models/TimeSeries/MarkovLink.hpp
Boom/inst/include/Models/TimeSeries/AugmentedTimeSeries.hpp
Boom/inst/include/Models/TimeSeries/PosteriorSamplers
Boom/inst/include/Models/TimeSeries/PosteriorSamplers/ArPosteriorSampler.hpp
Boom/inst/include/Models/TimeSeries/PosteriorSamplers/NonzeroMeanAr1Sampler.hpp
Boom/inst/include/Models/TimeSeries/PosteriorSamplers/ArSpikeSlabSampler.hpp
Boom/inst/include/Models/TimeSeries/NonzeroMeanAr1Model.hpp
Boom/inst/include/Models/DiscreteUniformModel.hpp
Boom/inst/include/Models/VectorModel.hpp
Boom/inst/include/Models/CategoricalData.hpp
Boom/inst/include/Models/MarkovModel.hpp
Boom/inst/include/r_interface
Boom/inst/include/r_interface/create_mixture_component.hpp
Boom/inst/include/r_interface/determine_nthreads.hpp
Boom/inst/include/r_interface/create_poisson_cluster_components.hpp
Boom/inst/include/r_interface/print_R_timestamp.hpp
Boom/inst/include/r_interface/boom_r_tools.hpp
Boom/inst/include/r_interface/handle_exception.hpp
Boom/inst/include/r_interface/create_point_process.hpp
Boom/inst/include/r_interface/create_poisson_process.hpp
Boom/inst/include/r_interface/seed_rng_from_R.hpp
Boom/inst/include/r_interface/create_state_model.hpp
Boom/inst/include/r_interface/parse_model_formula.hpp
Boom/inst/include/r_interface/list_io.hpp
Boom/inst/include/r_interface/prior_specification.hpp
Boom/inst/include/numopt.hpp
Boom/inst/include/uint.hpp
Boom/inst/include/numopt
Boom/inst/include/numopt/NumericalDerivatives.hpp
Boom/inst/include/numopt/Powell.hpp
Boom/inst/include/numopt/ScalarNewtonMax.hpp
Boom/inst/include/numopt/Integral.hpp
Boom/inst/include/numopt/Brent.hpp
Boom/inst/include/numopt/NelderMead.hpp
Boom/inst/include/numopt/ScalarLaplaceApproximation.hpp
Boom/inst/include/numopt/initialize_derivatives.hpp
Boom/inst/include/BOOM.hpp
Boom/src
Boom/src/create_mixture_component.cpp
Boom/src/Makevars
Boom/src/spike_slab_prior.cpp
Boom/src/math
Boom/src/math/special_functions.hpp
Boom/src/math/cephes
Boom/src/math/cephes/zetac.cpp
Boom/src/math/cephes/sici.cpp
Boom/src/math/cephes/zeta.cpp
Boom/src/math/cephes/planck.cpp
Boom/src/math/cephes/fresnl.cpp
Boom/src/math/cephes/powi.cpp
Boom/src/math/cephes/ei.cpp
Boom/src/math/cephes/polevl.cpp
Boom/src/math/cephes/expn.cpp
Boom/src/math/cephes/chbevl.cpp
Boom/src/math/cephes/polylog.cpp
Boom/src/math/cephes/fac.cpp
Boom/src/math/cephes/dawsn.cpp
Boom/src/math/cephes/rgamma.cpp
Boom/src/math/cephes/shichi.cpp
Boom/src/math/cephes/cephes_impl.hpp
Boom/src/math/cephes/spence.cpp
Boom/src/create_poisson_process.cpp
Boom/src/print_R_timestamp.cpp
Boom/src/handle_exception.cpp
Boom/src/install.libs.R
Boom/src/Samplers
Boom/src/Samplers/ScalarLangevinSampler.cpp
Boom/src/Samplers/MH_Proposals.cpp
Boom/src/Samplers/MoveAccounting.cpp
Boom/src/Samplers/Sampler.cpp
Boom/src/Samplers/MetropolisHastings.cpp
Boom/src/Samplers/RejectionSampler.cpp
Boom/src/Samplers/UnivariateLangevinSampler.cpp
Boom/src/Samplers/TIM.cpp
Boom/src/Samplers/ARMS.cpp
Boom/src/Samplers/SliceSampler.cpp
Boom/src/Samplers/ScalarAdaptiveRejectionSampler.cpp
Boom/src/Samplers/ImportanceResampler.cpp
Boom/src/Samplers/DirectProposal.cpp
Boom/src/Samplers/ScalarSliceSampler.cpp
Boom/src/Samplers/Gilks
Boom/src/Samplers/Gilks/arms.cpp
Boom/src/Samplers/UnivariateSliceSampler.cpp
Boom/src/create_poisson_cluster_components.cpp
Boom/src/distributions
Boom/src/distributions/Markov.cpp
Boom/src/distributions/rmulti.cpp
Boom/src/distributions/mvn.cpp
Boom/src/distributions/BinomialDistribution.cpp
Boom/src/distributions/Tn2Sampler.cpp
Boom/src/distributions/trun_logit.cpp
Boom/src/distributions/trun_norm.cpp
Boom/src/distributions/trun_exp.cpp
Boom/src/distributions/random_int.cpp
Boom/src/distributions/Rmath_dist.cpp
Boom/src/distributions/student_fix.cpp
Boom/src/distributions/rlexp.cpp
Boom/src/distributions/BoundedAdaptiveRejectionSampler.cpp
Boom/src/distributions/matrix_normal.cpp
Boom/src/distributions/usp.cpp
Boom/src/distributions/DoublyBoundedAdaptiveRejectionSampler.cpp
Boom/src/distributions/dirichlet.cpp
Boom/src/distributions/random_cor.cpp
Boom/src/distributions/trun_gamma.cpp
Boom/src/distributions/Wishart.cpp
Boom/src/distributions/extreme_value.cpp
Boom/src/distributions/rtriangle.cpp
Boom/src/distributions/rng.cpp
Boom/src/distributions/inverse_gaussian.cpp
Boom/src/distributions/mvt.cpp
Boom/src/list_io.cpp
Boom/src/LinAlg
Boom/src/LinAlg/Selector.cpp
Boom/src/LinAlg/QR.cpp
Boom/src/LinAlg/VectorView.cpp
Boom/src/LinAlg/Eigen.cpp
Boom/src/LinAlg/SubMatrix.cpp
Boom/src/LinAlg/Cholesky.cpp
Boom/src/LinAlg/Matrix.cpp
Boom/src/LinAlg/LinAlgExceptions.cpp
Boom/src/LinAlg/MatrixPartition.cpp
Boom/src/LinAlg/stack_columns.cpp
Boom/src/LinAlg/Givens.cpp
Boom/src/LinAlg/blas.cpp
Boom/src/LinAlg/SVD.cpp
Boom/src/LinAlg/Kronecker.cpp
Boom/src/LinAlg/Array.cpp
Boom/src/LinAlg/SWEEP.cpp
Boom/src/LinAlg/ArrayIterator.cpp
Boom/src/LinAlg/Vector.cpp
Boom/src/LinAlg/DiagonalMatrix.cpp
Boom/src/LinAlg/CorrelationMatrix.cpp
Boom/src/LinAlg/SpdMatrix.cpp
Boom/src/LinAlg/LU.cpp
Boom/src/LinAlg/Array3.cpp
Boom/src/create_state_model.cpp
Boom/src/cpputil
Boom/src/cpputil/is_numeric.cpp
Boom/src/cpputil/split_string.cpp
Boom/src/cpputil/is_all_white.cpp
Boom/src/cpputil/strip_path.cpp
Boom/src/cpputil/LongString.cpp
Boom/src/cpputil/strip.cpp
Boom/src/cpputil/report_error.cpp
Boom/src/cpputil/ParamHolder.cpp
Boom/src/cpputil/infinity.cpp
Boom/src/cpputil/strip_white_space.cpp
Boom/src/cpputil/split.cpp
Boom/src/cpputil/gll.cpp
Boom/src/cpputil/DateTime.cpp
Boom/src/cpputil/DefaultVnames.cpp
Boom/src/cpputil/get_date.cpp
Boom/src/cpputil/lse.cpp
Boom/src/cpputil/print_columns.cpp
Boom/src/cpputil/Constants.cpp
Boom/src/cpputil/read_file.cpp
Boom/src/cpputil/safelog.cpp
Boom/src/cpputil/rep.cpp
Boom/src/cpputil/str2d.cpp
Boom/src/cpputil/trim_white_space.cpp
Boom/src/cpputil/Date.cpp
Boom/src/cpputil/split_delimited.cpp
Boom/src/cpputil/OutputTable.cpp
Boom/src/cpputil/legalize_file_name.cpp
Boom/src/cpputil/parse_range.cpp
Boom/src/cpputil/Polynomial.cpp
Boom/src/cpputil/compare_vector_bool.cpp
Boom/src/cpputil/Redirector.cpp
Boom/src/cpputil/apply_permutation.cpp
Boom/src/cpputil/replace_all.cpp
Boom/src/cpputil/substring_delimited.cpp
Boom/src/cpputil/cat_string.cpp
Boom/src/boom_r_tools.cpp
Boom/src/TargetFun
Boom/src/TargetFun/ScalarLogpostTF.cpp
Boom/src/TargetFun/LogPost.cpp
Boom/src/TargetFun/JacobianChecker.cpp
Boom/src/TargetFun/TargetFun.cpp
Boom/src/TargetFun/Transformation.cpp
Boom/src/determine_nthreads.cpp
Boom/src/stats
Boom/src/stats/NaturalSpline.cpp
Boom/src/stats/diff.cpp
Boom/src/stats/ChiSquareTest.cpp
Boom/src/stats/regression.cpp
Boom/src/stats/compare_predictions.cpp
Boom/src/stats/Design.cpp
Boom/src/stats/DataTable.cpp
Boom/src/stats/Resampler.cpp
Boom/src/stats/IQagent.cpp
Boom/src/stats/Spline.cpp
Boom/src/stats/simple_random_sample.cpp
Boom/src/stats/Bspline.cpp
Boom/src/stats/ECDF.cpp
Boom/src/stats/moments.cpp
Boom/src/stats/FreqDist.cpp
Boom/src/stats/compare_binomial_proportions.cpp
Boom/src/Models
Boom/src/Models/TruncatedGammaModel.cpp
Boom/src/Models/ScaledChisqModel.cpp
Boom/src/Models/ZeroInflatedGammaModel.cpp
Boom/src/Models/FiniteMixtureModel.cpp
Boom/src/Models/LognormalModel.cpp
Boom/src/Models/MvtModel.cpp
Boom/src/Models/Glm
Boom/src/Models/Glm/ZeroInflatedGammaRegression.cpp
Boom/src/Models/Glm/MvnGivenX.cpp
Boom/src/Models/Glm/PoissonRegressionModel.cpp
Boom/src/Models/Glm/GlmCoefs.cpp
Boom/src/Models/Glm/HierarchicalPoissonRegression.cpp
Boom/src/Models/Glm/MvtRegModel.cpp
Boom/src/Models/Glm/GammaRegressionModel.cpp
Boom/src/Models/Glm/Glm.cpp
Boom/src/Models/Glm/ZeroInflatedPoissonRegression.cpp
Boom/src/Models/Glm/BinomialLogitModel.cpp
Boom/src/Models/Glm/LogisticRegressionModel.cpp
Boom/src/Models/Glm/ChoiceData.cpp
Boom/src/Models/Glm/BinomialRegressionData.cpp
Boom/src/Models/Glm/MvReg2.cpp
Boom/src/Models/Glm/OrdinalCutpointModel.cpp
Boom/src/Models/Glm/WeightedRegressionModel.cpp
Boom/src/Models/Glm/MvnGivenXandSigma.cpp
Boom/src/Models/Glm/BinomialProbitModel.cpp
Boom/src/Models/Glm/PosteriorSamplers
Boom/src/Models/Glm/PosteriorSamplers/GammaRegressionPosteriorSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/PoissonRegressionRwmSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/CumulativeProbitSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/BinomialLogitSpikeSlabSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/VsPriorSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/LogitSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/ZeroInflatedLognormalRegressionPosteriorSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/TDataImputer.cpp
Boom/src/Models/Glm/PosteriorSamplers/draw_logit_lambda.cpp
Boom/src/Models/Glm/PosteriorSamplers/BinomialLogitSamplerTim.cpp
Boom/src/Models/Glm/PosteriorSamplers/BregVsSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/TRegressionSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/LogitSamplerBma.cpp
Boom/src/Models/Glm/PosteriorSamplers/PoissonRegressionSpikeSlabSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/NormalMixtureApproximation.cpp
Boom/src/Models/Glm/PosteriorSamplers/PoissonDataImputer.cpp
Boom/src/Models/Glm/PosteriorSamplers/RegressionConjSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/ZeroInflatedPoissonRegressionSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/fill_poisson_mixture_approximation_table_1.cpp
Boom/src/Models/Glm/PosteriorSamplers/TRegressionSpikeSlabSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/DAFE_MLM.cpp
Boom/src/Models/Glm/PosteriorSamplers/MlogitRwm.cpp
Boom/src/Models/Glm/PosteriorSamplers/MultinomialLogitCompleteDataSuf.cpp
Boom/src/Models/Glm/PosteriorSamplers/PoissonRegressionAuxMixSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/fill_poisson_mixture_approximation_table_3.cpp
Boom/src/Models/Glm/PosteriorSamplers/PartRegSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/BinomialProbitCompositeSpikeSlabSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/MnpBetaSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/BinomialLogitSamplerRwm.cpp
Boom/src/Models/Glm/PosteriorSamplers/SpikeSlabDaRegressionSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/AggregatedRegressionSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/BinomialProbitSpikeSlabSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/fill_poisson_mixture_approximation_table_2.cpp
Boom/src/Models/Glm/PosteriorSamplers/MLVS.cpp
Boom/src/Models/Glm/PosteriorSamplers/BinomialLogitCompositeSpikeSlabSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/HierarchicalPoissonRegressionSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/MultinomialLogitCompositeSpikeSlabSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/poisson_mixture_approximation_table.cpp
Boom/src/Models/Glm/PosteriorSamplers/SpikeSlabSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/ProbitRegressionSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/MvRegSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/MvtRegSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/MLVS_data_imputer.cpp
Boom/src/Models/Glm/PosteriorSamplers/BinomialLogitDataImputer.cpp
Boom/src/Models/Glm/PosteriorSamplers/CumulativeLogitSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/BinomialProbitTimSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/MLAuxMixSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/BinomialProbitDataImputer.cpp
Boom/src/Models/Glm/PosteriorSamplers/BinomialLogitAuxmixSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/ProbitSpikeSlabSampler.cpp
Boom/src/Models/Glm/PosteriorSamplers/MnpBetaGivenSigmaSampler.cpp
Boom/src/Models/Glm/VariableSelectionPrior.cpp
Boom/src/Models/Glm/PoissonRegressionData.cpp
Boom/src/Models/Glm/CumulativeLogitModel.cpp
Boom/src/Models/Glm/ZeroInflatedLognormalRegression.cpp
Boom/src/Models/Glm/MultinomialProbitModel.cpp
Boom/src/Models/Glm/CumulativeProbitModel.cpp
Boom/src/Models/Glm/ProbitRegression.cpp
Boom/src/Models/Glm/MultinomialLogitModel.cpp
Boom/src/Models/Glm/AggregatedRegressionModel.cpp
Boom/src/Models/Glm/RegressionModel.cpp
Boom/src/Models/Glm/TRegression.cpp
Boom/src/Models/WeightedMvnModel.cpp
Boom/src/Models/WeightedGaussianSuf.cpp
Boom/src/Models/CompositeVectorModel.cpp
Boom/src/Models/MvnGivenScalarSigma.cpp
Boom/src/Models/MvnBase.cpp
Boom/src/Models/IndependentMvnModelGivenScalarSigma.cpp
Boom/src/Models/ChisqModel.cpp
Boom/src/Models/GaussianModelGivenSigma.cpp
Boom/src/Models/PoissonGammaModel.cpp
Boom/src/Models/CompositeModel.cpp
Boom/src/Models/SpdParams.cpp
Boom/src/Models/BetaBinomialModel.cpp
Boom/src/Models/MvnGivenSigma.cpp
Boom/src/Models/DataTypes.cpp
Boom/src/Models/MvnModel.cpp
Boom/src/Models/IndependentMvnModel.cpp
Boom/src/Models/UniformModel.cpp
Boom/src/Models/GaussianModel.cpp
Boom/src/Models/Mixtures
Boom/src/Models/Mixtures/ConditionalFiniteMixtureModel.cpp
Boom/src/Models/Mixtures/PosteriorSamplers
Boom/src/Models/Mixtures/PosteriorSamplers/DirichletProcessMvnCollapsedGibbsSampler.cpp
Boom/src/Models/Mixtures/PosteriorSamplers/ConditionalFiniteMixtureSampler.cpp
Boom/src/Models/Mixtures/DirichletProcessMvnModel.cpp
Boom/src/Models/Policies
Boom/src/Models/Policies/MixtureDataPolicy.cpp
Boom/src/Models/Policies/ManyParamPolicy.cpp
Boom/src/Models/Policies/CompositeParamPolicy.cpp
Boom/src/Models/Policies/PriorPolicy.cpp
Boom/src/Models/Policies/NullParamPolicy.cpp
Boom/src/Models/ExponentialModel.cpp
Boom/src/Models/UniformShrinkagePriorModel.cpp
Boom/src/Models/CompositeData.cpp
Boom/src/Models/DiscreteUniformModel.cpp
Boom/src/Models/GaussianModelBase.cpp
Boom/src/Models/ModelTypes.cpp
Boom/src/Models/ParamTypes.cpp
Boom/src/Models/SpdModel.cpp
Boom/src/Models/MultinomialModel.cpp
Boom/src/Models/BetaModel.cpp
Boom/src/Models/HMM
Boom/src/Models/HMM/HmmFilter.cpp
Boom/src/Models/HMM/HMM2.cpp
Boom/src/Models/HMM/hmm_tools.cpp
Boom/src/Models/HMM/Clickstream
Boom/src/Models/HMM/Clickstream/NestedHmm.cpp
Boom/src/Models/HMM/Clickstream/Event.cpp
Boom/src/Models/HMM/Clickstream/Session.cpp
Boom/src/Models/HMM/Clickstream/Stream.cpp
Boom/src/Models/HMM/Clickstream/PosteriorSamplers
Boom/src/Models/HMM/Clickstream/PosteriorSamplers/NestedHmmPosteriorSampler.cpp
Boom/src/Models/HMM/PosteriorSamplers
Boom/src/Models/HMM/PosteriorSamplers/HmmPosteriorSampler.cpp
Boom/src/Models/HMM/HmmDataImputer.cpp
Boom/src/Models/HMM/HealthStateModel.cpp
Boom/src/Models/ZeroMeanGaussianModel.cpp
Boom/src/Models/ConstrainedVectorParams.cpp
Boom/src/Models/ProductDirichletModel.cpp
Boom/src/Models/CategoricalData.cpp
Boom/src/Models/UniformCorrelationModel.cpp
Boom/src/Models/GammaModel.cpp
Boom/src/Models/Bart
Boom/src/Models/Bart/PoissonBartModel.cpp
Boom/src/Models/Bart/GaussianBartModel.cpp
Boom/src/Models/Bart/ProbitBartModel.cpp
Boom/src/Models/Bart/Bart.cpp
Boom/src/Models/Bart/GaussianLinearBartModel.cpp
Boom/src/Models/Bart/PosteriorSamplers
Boom/src/Models/Bart/PosteriorSamplers/ProbitBartPosteriorSampler.cpp
Boom/src/Models/Bart/PosteriorSamplers/GaussianBartPosteriorSampler.cpp
Boom/src/Models/Bart/PosteriorSamplers/PoissonBartPosteriorSampler.cpp
Boom/src/Models/Bart/PosteriorSamplers/GaussianLinearBartPosteriorSampler.cpp
Boom/src/Models/Bart/PosteriorSamplers/LogitBartPosteriorSampler.cpp
Boom/src/Models/Bart/PosteriorSamplers/BartPosteriorSampler.cpp
Boom/src/Models/Bart/ResidualRegressionData.cpp
Boom/src/Models/Bart/LogitBartModel.cpp
Boom/src/Models/PosteriorSamplers
Boom/src/Models/PosteriorSamplers/ZeroInflatedGammaPosteriorSampler.cpp
Boom/src/Models/PosteriorSamplers/FixedProbBinomialSampler.cpp
Boom/src/Models/PosteriorSamplers/BetaPosteriorSampler.cpp
Boom/src/Models/PosteriorSamplers/SepStratSampler.cpp
Boom/src/Models/PosteriorSamplers/GammaPosteriorSampler.cpp
Boom/src/Models/PosteriorSamplers/ExponentialGammaSampler.cpp
Boom/src/Models/PosteriorSamplers/ZeroInflatedLognormalPosteriorSampler.cpp
Boom/src/Models/PosteriorSamplers/ZeroInflatedPoissonSampler.cpp
Boom/src/Models/PosteriorSamplers/GaussianVarSampler.cpp
Boom/src/Models/PosteriorSamplers/IndependentMvnConjSampler.cpp
Boom/src/Models/PosteriorSamplers/ExchangeableDirichletSampler.cpp
Boom/src/Models/PosteriorSamplers/ZeroMeanGaussianConjSampler.cpp
Boom/src/Models/PosteriorSamplers/SharedSigsqSampler.cpp
Boom/src/Models/PosteriorSamplers/CompositeModelSampler.cpp
Boom/src/Models/PosteriorSamplers/BetaBinomialSampler.cpp
Boom/src/Models/PosteriorSamplers/ZeroMeanMvnIndependenceSampler.cpp
Boom/src/Models/PosteriorSamplers/MarkovConjSampler.cpp
Boom/src/Models/PosteriorSamplers/PoissonGammaSampler.cpp
Boom/src/Models/PosteriorSamplers/MvnVarSampler.cpp
Boom/src/Models/PosteriorSamplers/MvnIndependentVarianceSampler.cpp
Boom/src/Models/PosteriorSamplers/MarkovConjShrinkageSampler.cpp
Boom/src/Models/PosteriorSamplers/ProductDirichletPosteriorSampler.cpp
Boom/src/Models/PosteriorSamplers/GaussianConjSampler.cpp
Boom/src/Models/PosteriorSamplers/CompositeSampler.cpp
Boom/src/Models/PosteriorSamplers/ZeroMeanMvnConjSampler.cpp
Boom/src/Models/PosteriorSamplers/CorrelationSampler.cpp
Boom/src/Models/PosteriorSamplers/PoissonGammaPosteriorSampler.cpp
Boom/src/Models/PosteriorSamplers/IndependentMvnVarSampler.cpp
Boom/src/Models/PosteriorSamplers/MultinomialDirichletSampler.cpp
Boom/src/Models/PosteriorSamplers/MvnConjSampler.cpp
Boom/src/Models/PosteriorSamplers/AbsorbingMarkovConjSampler.cpp
Boom/src/Models/PosteriorSamplers/PosteriorSampler.cpp
Boom/src/Models/PosteriorSamplers/BetaBinomialPosteriorSampler.cpp
Boom/src/Models/PosteriorSamplers/GenericGaussianVarianceSampler.cpp
Boom/src/Models/PosteriorSamplers/MvnMeanSampler.cpp
Boom/src/Models/PosteriorSamplers/GaussianMeanSampler.cpp
Boom/src/Models/PosteriorSamplers/DirichletPosteriorSampler.cpp
Boom/src/Models/Sufstat.cpp
Boom/src/Models/StateSpace
Boom/src/Models/StateSpace/StateSpaceLogitModel.cpp
Boom/src/Models/StateSpace/StateSpaceNormalMixture.cpp
Boom/src/Models/StateSpace/StateSpaceModel.cpp
Boom/src/Models/StateSpace/StateSpacePoissonModel.cpp
Boom/src/Models/StateSpace/AggregatedStateSpaceRegression.cpp
Boom/src/Models/StateSpace/PosteriorSamplers
Boom/src/Models/StateSpace/PosteriorSamplers/AggregatedStateSpacePosteriorSampler.cpp
Boom/src/Models/StateSpace/PosteriorSamplers/StateSpaceLogitPosteriorSampler.cpp
Boom/src/Models/StateSpace/PosteriorSamplers/StateSpacePosteriorSampler.cpp
Boom/src/Models/StateSpace/PosteriorSamplers/StateSpaceStudentPosteriorSampler.cpp
Boom/src/Models/StateSpace/PosteriorSamplers/StateSpacePoissonPosteriorSampler.cpp
Boom/src/Models/StateSpace/PosteriorSamplers/DynamicRegressionPosteriorSampler.cpp
Boom/src/Models/StateSpace/PosteriorSamplers/StudentLocalLinearTrendPosteriorSampler.cpp
Boom/src/Models/StateSpace/StateSpaceStudentRegressionModel.cpp
Boom/src/Models/StateSpace/Filters
Boom/src/Models/StateSpace/Filters/KalmanTools.cpp
Boom/src/Models/StateSpace/Filters/SparseKalmanTools.cpp
Boom/src/Models/StateSpace/Filters/SparseMatrix.cpp
Boom/src/Models/StateSpace/Filters/SparseVector.cpp
Boom/src/Models/StateSpace/StateSpaceRegressionModel.cpp
Boom/src/Models/StateSpace/StateModels
Boom/src/Models/StateSpace/StateModels/RandomWalkHolidayStateModel.cpp
Boom/src/Models/StateSpace/StateModels/TrigStateModel.cpp
Boom/src/Models/StateSpace/StateModels/DynamicRegressionStateModel.cpp
Boom/src/Models/StateSpace/StateModels/LocalLevelStateModel.cpp
Boom/src/Models/StateSpace/StateModels/LocalLinearTrend.cpp
Boom/src/Models/StateSpace/StateModels/SeasonalStateModel.cpp
Boom/src/Models/StateSpace/StateModels/StudentLocalLinearTrend.cpp
Boom/src/Models/StateSpace/StateModels/Holiday.cpp
Boom/src/Models/StateSpace/StateModels/LocalLinearTrendMeanRevertingSlope.cpp
Boom/src/Models/StateSpace/StateModels/StateModel.cpp
Boom/src/Models/StateSpace/StateModels/RegressionStateModel.cpp
Boom/src/Models/StateSpace/StateModels/ArStateModel.cpp
Boom/src/Models/StateSpace/StateSpaceModelBase.cpp
Boom/src/Models/WishartModel.cpp
Boom/src/Models/PointProcess
Boom/src/Models/PointProcess/WeeklyCyclePoissonProcess.cpp
Boom/src/Models/PointProcess/MarkovModulatedPoissonProcess.cpp
Boom/src/Models/PointProcess/PoissonClusterProcess.cpp
Boom/src/Models/PointProcess/HomogeneousPoissonProcess.cpp
Boom/src/Models/PointProcess/BoundedPoissonProcessSimulator.cpp
Boom/src/Models/PointProcess/PosteriorSamplers
Boom/src/Models/PointProcess/PosteriorSamplers/HomogeneousPoissonProcessPosteriorSampler.cpp
Boom/src/Models/PointProcess/PosteriorSamplers/MarkovModulatedPoissonProcessPosteriorSampler.cpp
Boom/src/Models/PointProcess/PosteriorSamplers/WeeklyCyclePoissonProcessSampler.cpp
Boom/src/Models/PointProcess/CosinePoissonProcess.cpp
Boom/src/Models/PointProcess/PointProcess.cpp
Boom/src/Models/ZeroInflatedLognormalModel.cpp
Boom/src/Models/SpdData.cpp
Boom/src/Models/DirichletModel.cpp
Boom/src/Models/IRT
Boom/src/Models/IRT/DafePcrItemSampler.cpp
Boom/src/Models/IRT/PartialCreditModel.cpp
Boom/src/Models/IRT/SubjectSliceSampler.cpp
Boom/src/Models/IRT/DafePcrRwmItemSampler.cpp
Boom/src/Models/IRT/DafePcrDataImputer.cpp
Boom/src/Models/IRT/IrtModel.cpp
Boom/src/Models/IRT/SubjectPrior.cpp
Boom/src/Models/IRT/Item.cpp
Boom/src/Models/IRT/DafePcrSubject.cpp
Boom/src/Models/IRT/Subject.cpp
Boom/src/Models/IRT/DafePcrRwmSubject.cpp
Boom/src/Models/IRT/IRT.cpp
Boom/src/Models/PoissonModel.cpp
Boom/src/Models/MarginallyUniformCorrelationModel.cpp
Boom/src/Models/Hierarchical
Boom/src/Models/Hierarchical/HierarchicalZeroInflatedPoissonModel.cpp
Boom/src/Models/Hierarchical/HierarchicalZeroInflatedGammaModel.cpp
Boom/src/Models/Hierarchical/PosteriorSamplers
Boom/src/Models/Hierarchical/PosteriorSamplers/HierarchicalZeroInflatedPoissonSampler.cpp
Boom/src/Models/Hierarchical/PosteriorSamplers/HierarchicalDirichletPosteriorSampler.cpp
Boom/src/Models/Hierarchical/PosteriorSamplers/HierarchicalGammaSampler.cpp
Boom/src/Models/Hierarchical/PosteriorSamplers/HierarchicalPoissonSampler.cpp
Boom/src/Models/Hierarchical/PosteriorSamplers/HierarchicalZeroInflatedGammaSampler.cpp
Boom/src/Models/Hierarchical/HierarchicalGammaModel.cpp
Boom/src/Models/Hierarchical/HierarchicalDirichletModel.cpp
Boom/src/Models/Hierarchical/HierarchicalPoissonModel.cpp
Boom/src/Models/MarkovModel.cpp
Boom/src/Models/ZeroInflatedPoissonModel.cpp
Boom/src/Models/ZeroMeanMvnModel.cpp
Boom/src/Models/TimeSeries
Boom/src/Models/TimeSeries/NonzeroMeanAr1Model.cpp
Boom/src/Models/TimeSeries/PosteriorSamplers
Boom/src/Models/TimeSeries/PosteriorSamplers/ArSpikeSlabSampler.cpp
Boom/src/Models/TimeSeries/PosteriorSamplers/ArPosteriorSampler.cpp
Boom/src/Models/TimeSeries/PosteriorSamplers/NonzeroMeanAr1Sampler.cpp
Boom/src/Models/TimeSeries/ArModel.cpp
Boom/src/Models/BinomialModel.cpp
Boom/src/prior_specification.cpp
Boom/src/numopt
Boom/src/numopt/newton.cpp
Boom/src/numopt/ScalarNewtonMax.cpp
Boom/src/numopt/NelderMead.cpp
Boom/src/numopt/simulated_annealing.cpp
Boom/src/numopt/initialize_derivatives.cpp
Boom/src/numopt/NumericalDerivatives.cpp
Boom/src/numopt/Negate.cpp
Boom/src/numopt/nelder_mead.cpp
Boom/src/numopt/bfgs.cpp
Boom/src/numopt/ScalarLaplaceApproximation.cpp
Boom/src/numopt/conj_grad.cpp
Boom/src/numopt/Integral.cpp
Boom/src/numopt/Powell.cpp
Boom/src/numopt/Brent.cpp
Boom/src/numopt/max_nd.cpp
Boom/src/parse_model_formula.cpp
Boom/src/Bmath
Boom/src/Bmath/mlutils.cpp
Boom/src/Bmath/rnchisq.cpp
Boom/src/Bmath/gammalims.cpp
Boom/src/Bmath/dhyper.cpp
Boom/src/Bmath/ptukey.cpp
Boom/src/Bmath/sexp.cpp
Boom/src/Bmath/rhyper.cpp
Boom/src/Bmath/qbinom.cpp
Boom/src/Bmath/fsign.cpp
Boom/src/Bmath/dcauchy.cpp
Boom/src/Bmath/dnbinom.cpp
Boom/src/Bmath/qweibull.cpp
Boom/src/Bmath/toms708.cpp
Boom/src/Bmath/ftrunc.cpp
Boom/src/Bmath/dpq.hpp
Boom/src/Bmath/dnorm.cpp
Boom/src/Bmath/bd0.cpp
Boom/src/Bmath/rnbinom.cpp
Boom/src/Bmath/snorm.cpp
Boom/src/Bmath/qf.cpp
Boom/src/Bmath/qnorm.cpp
Boom/src/Bmath/fround.cpp
Boom/src/Bmath/phyper.cpp
Boom/src/Bmath/pbeta.cpp
Boom/src/Bmath/qbeta.cpp
Boom/src/Bmath/nmath.hpp
Boom/src/Bmath/rexp.cpp
Boom/src/Bmath/dlogis.cpp
Boom/src/Bmath/pgeom.cpp
Boom/src/Bmath/rnorm.cpp
Boom/src/Bmath/rt.cpp
Boom/src/Bmath/rbinom.cpp
Boom/src/Bmath/pweibull.cpp
Boom/src/Bmath/qnchisq.cpp
Boom/src/Bmath/pt.cpp
Boom/src/Bmath/rweibull.cpp
Boom/src/Bmath/unif_rand.cpp
Boom/src/Bmath/rlnorm.cpp
Boom/src/Bmath/Random.hpp
Boom/src/Bmath/stirlerr.cpp
Boom/src/Bmath/dgamma.cpp
Boom/src/Bmath/rgeom.cpp
Boom/src/Bmath/sign.cpp
Boom/src/Bmath/pexp.cpp
Boom/src/Bmath/mathlib_error.cpp
Boom/src/Bmath/pf.cpp
Boom/src/Bmath/qnbinom.cpp
Boom/src/Bmath/choose.cpp
Boom/src/Bmath/polygamma.cpp
Boom/src/Bmath/qtukey.cpp
Boom/src/Bmath/pnt.cpp
Boom/src/Bmath/plogis.cpp
Boom/src/Bmath/lbeta.cpp
Boom/src/Bmath/dpois.cpp
Boom/src/Bmath/gamma_cody.cpp
Boom/src/Bmath/rmultinom.cpp
Boom/src/Bmath/pchisq.cpp
Boom/src/Bmath/dnbeta.cpp
Boom/src/Bmath/pnbeta.cpp
Boom/src/Bmath/pcauchy.cpp
Boom/src/Bmath/pnbinom.cpp
Boom/src/Bmath/qexp.cpp
Boom/src/Bmath/qhyper.cpp
Boom/src/Bmath/rgamma.cpp
Boom/src/Bmath/fprec.cpp
Boom/src/Bmath/punif.cpp
Boom/src/Bmath/Bmath.hpp
Boom/src/Bmath/dt.cpp
Boom/src/Bmath/runif.cpp
Boom/src/Bmath/dunif.cpp
Boom/src/Bmath/qgamma.cpp
Boom/src/Bmath/i1mach.cpp
Boom/src/Bmath/dchisq.cpp
Boom/src/Bmath/qlnorm.cpp
Boom/src/Bmath/qgeom.cpp
Boom/src/Bmath/lgammacor.cpp
Boom/src/Bmath/rlogis.cpp
Boom/src/Bmath/rchisq.cpp
Boom/src/Bmath/d1mach.cpp
Boom/src/Bmath/pnorm.cpp
Boom/src/Bmath/qlogis.cpp
Boom/src/Bmath/qcauchy.cpp
Boom/src/Bmath/beta.cpp
Boom/src/Bmath/df.cpp
Boom/src/Bmath/dweibull.cpp
Boom/src/Bmath/dlnorm.cpp
Boom/src/Bmath/ppois.cpp
Boom/src/Bmath/plnorm.cpp
Boom/src/Bmath/dbeta.cpp
Boom/src/Bmath/dnchisq.cpp
Boom/src/Bmath/qt.cpp
Boom/src/Bmath/dbinom.cpp
Boom/src/Bmath/qunif.cpp
Boom/src/Bmath/rf.cpp
Boom/src/Bmath/pnchisq.cpp
Boom/src/Bmath/pnf.cpp
Boom/src/Bmath/qchisq.cpp
Boom/src/Bmath/pbinom.cpp
Boom/src/Bmath/dgeom.cpp
Boom/src/Bmath/rpois.cpp
Boom/src/Bmath/qpois.cpp
Boom/src/Bmath/pgamma.cpp
Boom/src/Bmath/rcauchy.cpp
Boom/src/Bmath/rbeta.cpp
Boom/src/Bmath/chebyshev.cpp
Boom/src/Bmath/dexp.cpp
Boom/src/Interfaces
Boom/src/Interfaces/R
Boom/src/Interfaces/R/BoomInterface
Boom/src/Interfaces/R/BoomInterface/test
Boom/src/Interfaces/R/BoomInterface/test/generate_factor_data_test.R
Boom/src/Interfaces/R/BoomInterface/test/match_data_frame_test.R
Boom/src/Interfaces/R/BoomInterface/test/testdriver.R
Boom/src/create_point_process.cpp
Boom/src/extract_mixture_data.cpp
Boom/src/seed_rng_from_R.cpp
Boom/NAMESPACE
Boom/R
Boom/R/histabunch.R Boom/R/compare.vector.distribution.R Boom/R/match_data_frame.R Boom/R/pairs.density.R Boom/R/boxplot.mcmc.matrix.R Boom/R/suggest_burn_log_likelihood.R Boom/R/compare.many.ts.R Boom/R/boxplot.true.R Boom/R/add.segments.R Boom/R/compare.many.densities.R Boom/R/plot.macf.R Boom/R/external.legend.R Boom/R/plot.many.ts.R Boom/R/compare.den.R Boom/R/plot.dynamic.distribution.R Boom/R/check.data.R Boom/R/prior_specification.R Boom/R/generate_factor_data.R Boom/R/thin.R Boom/R/is.even.R
Boom/MD5
Boom/DESCRIPTION
Boom/man
Boom/man/histabunch.Rd Boom/man/check.data.Rd Boom/man/plot.macf.Rd Boom/man/mvn.diagonal.prior.Rd Boom/man/double.model.Rd Boom/man/normal.inverse.gamma.prior.Rd Boom/man/mvn.independent.sigma.prior.Rd Boom/man/normal.inverse.wishart.prior.Rd Boom/man/compare.vector.distributions.Rd Boom/man/plot.density.contours.Rd Boom/man/compare.many.densities.Rd Boom/man/generate_factor_data.Rd Boom/man/boxplot.true.Rd Boom/man/beta.prior.Rd Boom/man/boxplot.mcmc.matrix.Rd Boom/man/ar1.coefficient.prior.Rd Boom/man/gamma.prior.Rd Boom/man/pairs.density.Rd Boom/man/dirichlet.prior.Rd Boom/man/lognormal.prior.Rd Boom/man/plot.dynamic.distribution.Rd Boom/man/add.segments.Rd Boom/man/compare.den.Rd Boom/man/thin.Rd Boom/man/external.legend.Rd Boom/man/suggest.burn.log.likelihood.Rd Boom/man/mvn.prior.Rd Boom/man/compare.many.ts.Rd Boom/man/discrete-uniform-prior.Rd Boom/man/sd.prior.Rd Boom/man/match_data_frame.Rd Boom/man/markov.prior.Rd Boom/man/is.even.Rd Boom/man/plot.many.ts.Rd Boom/man/normal.prior.Rd Boom/man/uniform.prior.Rd
Boom/LICENSE

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